PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g190040.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 395aa MW: 43489.4 Da PI: 9.436

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g190040.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	2e-30	104	163	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Pd.00g190040.m01 104 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 163 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MEMSRMKEEN KVLRKGVEQT MKDYYDLQMK FTSLHQSNQN KDPQTFLSLD GNDPDAVHRP 60 KTIPKRSPNK LQRTELAGIS SHVASQPNRK ARVSVRARCE SATMNDGCQW RKYGQKIAKG 120 NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA MASTASAAAS 180 FMLLESSNHH LLDGTPSNYT QASLPNYYNV PDHRMNPSSH SSSNFRTINP LDPSKGIVLD 240 LTNNFYDHNN TPQNIPMGSS SSHSSVPPGF SNWMMSTSRS ASSYQNPNSI TSHLLANSTI 300 SRSSGVGVED QRSWRGEENN MSLAENVTAI ASDPKFRVAV AAAITSLINK ENHTANHPFG 360 PRDGGENGSS TSNNWALDHQ SLSANGKPIR KNSLE

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MEMSRMKEEN KVLRKGVEQT MKDYYDLQMK FTSLHQSNQN KDPQTFLSLD GNDPDAVHRP  60
KTIPKRSPNK LQRTELAGIS SHVASQPNRK ARVSVRARCE SATMNDGCQW RKYGQKIAKG  120
NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA MASTASAAAS  180
FMLLESSNHH LLDGTPSNYT QASLPNYYNV PDHRMNPSSH SSSNFRTINP LDPSKGIVLD  240
LTNNFYDHNN TPQNIPMGSS SSHSSVPPGF SNWMMSTSRS ASSYQNPNSI TSHLLANSTI  300
SRSSGVGVED QRSWRGEENN MSLAENVTAI ASDPKFRVAV AAAITSLINK ENHTANHPFG  360
PRDGGENGSS TSNNWALDHQ SLSANGKPIR KNSLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	4e-68	WRKY family protein