PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g183960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 355aa MW: 41029.8 Da PI: 4.8405 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 116.2 | 2e-36 | 34 | 126 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y+i++d+++++++sws+++nsfvvld+++f+ ++Lp+yFkh+nf+SFvRQLn+YgF+kv++++ weF++k F +g+k+ll Pd.00g183960.m01 34 FLTKTYDIVDDPTTNDIVSWSRDNNSFVVLDPHKFSISLLPRYFKHNNFSSFVRQLNTYGFRKVDTDR---------WEFANKGFLRGQKHLL 117 9*****************************************************************99.........**************** PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 ++i+r+k++ Pd.00g183960.m01 118 KNIRRRKTS 126 ******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MNSDQDPVSL SSSGAVPDHP LPMDKLYEQG PPPFLTKTYD IVDDPTTNDI VSWSRDNNSF 60 VVLDPHKFSI SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANKGFL RGQKHLLKNI 120 RRRKTSYHPQ ASQKALDSCV EVGKFGLDGE IDQLRRDKQV LMGELVKLRQ QQQTTRVYLH 180 GMENRLKRTE MKQQHLKNFL ARAMQNPNFV QQLAQQKDKR NELEEAITKK RRRPIEQGPS 240 TFEVDELGQV GAETFVKVEP QEYDDLCDHF ENPELDTFAI DMQGITGSQN VHDEEECIEK 300 EEGNESGSKD PGKSFWHELL NESFDEEIGM LGVQEDDEDV DVFVEELVYL ASSPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 1e-116 | HSF family protein |