PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g183580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 600aa MW: 66335.8 Da PI: 4.8495 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.7 | 2.5e-07 | 100 | 147 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 GV+++ gr++A ++d +e + +k g f t+eeAa+a++ a++kl+g Pd.00g183580.m01 100 GVSRYT-GGRYEAFLWDNTEpR--SKGKT-GGFETEEEAARAHDLAALKLWG 147 9*9999.8*********65543..56655.77*****************987 PP | |||||||
2 | AP2 | 45.7 | 1.6e-14 | 190 | 241 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ ++W A++ +g k ++lg+f t+eeAa+a++ a+ +++g Pd.00g183580.m01 190 STYRGVSRNSYHKKWQARLGK---GG-GlKGVYLGTFATEEEAARAYDVAAIRMKG 241 56****************444...33.46************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence |
MQHNSPWILE SSPVEAPHCN TFPSANYPFS SSMHVESDQG FIGEKNINDN GINIFGDPFM 60 SYDCINEEDN GRSGEKPTKR KRHCKNSKKK IVQTGSAFYG VSRYTGGRYE AFLWDNTEPR 120 SKGKTGGFET EEEAARAHDL AALKLWGDFA TLNFTLNEYK KELEEMQGMS KQDYFLHIRR 180 TSATFAKGLS TYRGVSRNSY HKKWQARLGK GGGLKGVYLG TFATEEEAAR AYDVAAIRMK 240 GTKAVTNFDL SQYDLNSIFN SAKLPIGKGA SKKLRWSSVD DVLENRRSSG ANQKIPILQL 300 DEDYSTGISR LSSTTQPSSS FEPTIHPILP TPNNSNLNQY VSPFSHHALQ NTDIQYNQLP 360 QDFNVNPSSQ VHDVPGCENL NFQRSPSLNQ WVGTYGGGDN SEGSGFSVGG SQIYGSLDGD 420 PTMRQFVDGN SSGFSFGRDV ENHEFDQLHQ YNSDSYSQYL NQNSSFSSLL QDSMQVPNNP 480 QTFYPTFLPG LTNLDPGPSY IGESSRSASQ VPEVSLEAML AENNQSCGNG IINEVFSLDH 540 EVPVNIIEGN STVQPGYAEN GNFVEDFGVG KSAGLDLDDD FPASWVEMFL MTLEGSDCHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 2e-50 | AP2 family protein |