PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g182430.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 342aa MW: 37365.1 Da PI: 9.9095 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.8 | 3.5e-31 | 274 | 331 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ +dp ++++tYegeH+h Pd.00g182430.m01 274 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 331 9************************9888****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MAVELMNFPK MEDQKAIQEA ASQGLKSMEH LIRFLSHQQQ TNQSSRLDCT DITDHTVSKF 60 KKVISLLNRT GHARFRRGPV QPDQPVQFPS SSSHPSYSQT LSFAPALNPR PSQAPAPVTT 120 PAIVPLAPIE SSYVQSQPHI MTLDFTRPNV FASNPKSTEI EFAKESFSVS SSSSFMSSAI 180 TGDGSVSNGK QGSSIFLAPA PAVSGAKPPL STAPFKKRCH EHDHHSDDAS CKYSGSGSAS 240 GSGKCHCSKR RKNRVKKTIR VPAISSKIAD IPPDEYSWRK YGQKPIKGSP YPRGYYKCST 300 VRGCPARKHV ERAPDDPAML IVTYEGEHRH APENVGLAFE ST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24570.1 | 1e-115 | WRKY family protein |