PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g177590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 490aa MW: 53435.6 Da PI: 6.7869

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g177590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.7	1.5e-16	328	374	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq Pd.00g177590.m01 328 VHNLSERRRRDRINEKMRALQELIPHS-----NKTDKASMLDEAIEYLKSLQ 374 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MGPDHELVEL LWRNGQVVLH SQTHRKPSPN PPNEARQVQK QDQQTIRVGG LYGNSSNLTQ 60 DEDTGSLIHY PLEDSFDKEF CSHFFSELPS CDPIEIDKPT KQFEEKFAKF GASDTPHLVS 120 TAPQPNVKSP AGMGYPANPM PPPRYQYNNS TEQNQNLGGL GKVVNFSTFA TPGKGDRGSS 180 RGTIGGKESG NLTQGEVKEC SVMTVGSSYV GSNQVLNDLD VSRASSNCDG TTGLSVGPFY 240 DNVQKMMPQS ETGKTDTLDP TLTSSSGGSG SSFGRGGKRS NVVNSNKRKG RDAEDSECQS 300 EAAELESAAG NKSAQRSGSS RRSRAAEVHN LSERRRRDRI NEKMRALQEL IPHSNKTDKA 360 SMLDEAIEYL KSLQMQLQVM WMGSGMAPMI VPLVDQCMNV APATNQAVMC QAPVLNPVDY 420 HNQMQNPAFQ EQYARLMGFH HMQTMSQPMN MFRFGSQPMQ QNQMIAPTGI NSGHLGGGVT 480 ANDTLSGKMC

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MGPDHELVEL LWRNGQVVLH SQTHRKPSPN PPNEARQVQK QDQQTIRVGG LYGNSSNLTQ  60
DEDTGSLIHY PLEDSFDKEF CSHFFSELPS CDPIEIDKPT KQFEEKFAKF GASDTPHLVS  120
TAPQPNVKSP AGMGYPANPM PPPRYQYNNS TEQNQNLGGL GKVVNFSTFA TPGKGDRGSS  180
RGTIGGKESG NLTQGEVKEC SVMTVGSSYV GSNQVLNDLD VSRASSNCDG TTGLSVGPFY  240
DNVQKMMPQS ETGKTDTLDP TLTSSSGGSG SSFGRGGKRS NVVNSNKRKG RDAEDSECQS  300
EAAELESAAG NKSAQRSGSS RRSRAAEVHN LSERRRRDRI NEKMRALQEL IPHSNKTDKA  360
SMLDEAIEYL KSLQMQLQVM WMGSGMAPMI VPLVDQCMNV APATNQAVMC QAPVLNPVDY  420
HNQMQNPAFQ EQYARLMGFH HMQTMSQPMN MFRFGSQPMQ QNQMIAPTGI NSGHLGGGVT  480
ANDTLSGKMC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	333	338	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	2e-49	bHLH family protein