PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g176860.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 559aa MW: 62727.2 Da PI: 7.9891

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g176860.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.8e-24	101	187	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+eYA++vGF +++++s++sk++g++++ + Cs+ g+++e+ ++ + + t+t+Cka+l++k+++dgkw+v+++ +eHnHe++p Pd.00g176860.m01 101 YYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESGTT---VNPRLCITKTDCKASLHIKRKDDGKWVVHSFIKEHNHEMCP 187 9***************************************9888...5666789******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MEIDLELPSC EQDKLETGSD KDVNVVDVTD EKNVEEHVNS PTTSEHVKEA DGLDANQSAC 60 SLQAQDDAKN MGLNAVDEGK RVIQEPQNGL EFESKEEAYS YYREYARSVG FGITIKASRR 120 SKKSGKFIDI KIACSRFGSK RESGTTVNPR LCITKTDCKA SLHIKRKDDG KWVVHSFIKE 180 HNHEMCPDDF IYAISGRNKK PATAACQKKG SVFKKFKVEV LGLASCQLQK DGENEATAIF 240 RVDDLEERQN FTVSWNEAEL KVCCSCHSFE YKGFLCRHAI LVLQVSGVSS IPSHYILKRW 300 TKDAKVRCTV SDGPKRLNYR VQRFNDLCKL AVKLGEEGSL SPETYHIAFQ ALEAALKHCV 360 DANNSVRTVS EANMSANHGF NDVEEVNPSS NMAKSSKKKK TYKKRKVQTE QDSVTIRLQD 420 SCQQMEQMKS RAHNRDNCYV PQQELEGEHG SRSRGLDSYY GAQQSMQGMR QLNSIAPISD 480 GYYGNQQATQ GQLHSLPTRV GHYGTQQSMR GMGQLSFRSP TVQSCFDIQG NLQDMEQSAG 540 SSHFHGNASK RLHDKHQTQ

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MEIDLELPSC EQDKLETGSD KDVNVVDVTD EKNVEEHVNS PTTSEHVKEA DGLDANQSAC  60
SLQAQDDAKN MGLNAVDEGK RVIQEPQNGL EFESKEEAYS YYREYARSVG FGITIKASRR  120
SKKSGKFIDI KIACSRFGSK RESGTTVNPR LCITKTDCKA SLHIKRKDDG KWVVHSFIKE  180
HNHEMCPDDF IYAISGRNKK PATAACQKKG SVFKKFKVEV LGLASCQLQK DGENEATAIF  240
RVDDLEERQN FTVSWNEAEL KVCCSCHSFE YKGFLCRHAI LVLQVSGVSS IPSHYILKRW  300
TKDAKVRCTV SDGPKRLNYR VQRFNDLCKL AVKLGEEGSL SPETYHIAFQ ALEAALKHCV  360
DANNSVRTVS EANMSANHGF NDVEEVNPSS NMAKSSKKKK TYKKRKVQTE QDSVTIRLQD  420
SCQQMEQMKS RAHNRDNCYV PQQELEGEHG SRSRGLDSYY GAQQSMQGMR QLNSIAPISD  480
GYYGNQQATQ GQLHSLPTRV GHYGTQQSMR GMGQLSFRSP TVQSCFDIQG NLQDMEQSAG  540
SSHFHGNASK RLHDKHQTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	3e-79	FAR1 family protein