PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g176840.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 643aa MW: 72865.7 Da PI: 6.2476

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g176840.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.1e-27	136	238	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e++ +r+ ++t+Cka+++vk++ dgkw+++++ Pd.00g176840.m01 136 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdPENATGRRSCSKTDCKASMHVKRRPDGKWVIHNF 228 5****************************************99999999988776554555559999******************** PP FAR1 82 eleHnHelap 91 ++eHnHel p Pd.00g176840.m01 229 VKEHNHELLP 238 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MLEEEDVIIF LTLTRLDNLV GSVSYIVLQT SKMIFSDNNQ LKLNNLTMDI DLRLPSGEPD 60 KEDEEPHGID NMLEHEEKLQ NGDIENGNIV DVRDEVHAED GGDLNSPTAD MVVFKEDTNL 120 EPLFGMEFAS HGEAYSFYQE YARSMGFNTA IQNSRRSKTS REFIDAKFAC SRYGTKREYD 180 KSYNRPRARQ NKQDPENATG RRSCSKTDCK ASMHVKRRPD GKWVIHNFVK EHNHELLPAQ 240 AVSEQTRKMY AAMARQFAEY KNVVGLKNDP KNPFDKEFLK QYEAILQDRY EEEAKADSDT 300 WNKQPTLRSP SPLEKSVSGV YTHAVFKKFQ VEVLGAVACH PKREGQDETT ITFRVQDFEK 360 NQDFIVTWNE MKTEVSCLCC LFEYKGYLCR HALIVLQICG LSAIPAQYIL KRWTKDVKNR 420 HLVGEESDHG LSRVQKFNDL CQRAMKVIEE GSLSQESYSV ACRALEEAFG NCVSVNNSSK 480 SLIEAGTSSV THGLLCIEDD SQNRSMGKTN KKKNPTKKRK VNSEPDVMTV GAQDSLQQMD 540 KLNPRAVTLD GYYGAPQSVQ GMVQLNLMAP TRDNYYGNQQ TIQGLGQLNS IAPSHDGYYS 600 AQQSMHGLGQ MDFFRTAGGF TYGMRDDPNV RTAPLHDDAS RHA

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MLEEEDVIIF LTLTRLDNLV GSVSYIVLQT SKMIFSDNNQ LKLNNLTMDI DLRLPSGEPD  60
KEDEEPHGID NMLEHEEKLQ NGDIENGNIV DVRDEVHAED GGDLNSPTAD MVVFKEDTNL  120
EPLFGMEFAS HGEAYSFYQE YARSMGFNTA IQNSRRSKTS REFIDAKFAC SRYGTKREYD  180
KSYNRPRARQ NKQDPENATG RRSCSKTDCK ASMHVKRRPD GKWVIHNFVK EHNHELLPAQ  240
AVSEQTRKMY AAMARQFAEY KNVVGLKNDP KNPFDKEFLK QYEAILQDRY EEEAKADSDT  300
WNKQPTLRSP SPLEKSVSGV YTHAVFKKFQ VEVLGAVACH PKREGQDETT ITFRVQDFEK  360
NQDFIVTWNE MKTEVSCLCC LFEYKGYLCR HALIVLQICG LSAIPAQYIL KRWTKDVKNR  420
HLVGEESDHG LSRVQKFNDL CQRAMKVIEE GSLSQESYSV ACRALEEAFG NCVSVNNSSK  480
SLIEAGTSSV THGLLCIEDD SQNRSMGKTN KKKNPTKKRK VNSEPDVMTV GAQDSLQQMD  540
KLNPRAVTLD GYYGAPQSVQ GMVQLNLMAP TRDNYYGNQQ TIQGLGQLNS IAPSHDGYYS  600
AQQSMHGLGQ MDFFRTAGGF TYGMRDDPNV RTAPLHDDAS RHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	1e-161	FAR1 family protein