PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g172070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 421aa MW: 47673.3 Da PI: 7.999

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g172070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100	1.6e-31	110	163	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Pd.00g172070.m01 110 PRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 163 8****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	111	162	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ Pd.00g172070.m01 111 RLRWTPDLHLAFVHAVERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 162 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLSGGPKEIY RRDMAPERIE ISDEDDQSSD ASYEIQAKND CLVSFQKCLF FDLNEEASTG 60 DDDQDVSSNE GTQAVGSRTS PEGNLSCNNT SVEGKERTIA VRQYVRSKMP RLRWTPDLHL 120 AFVHAVERLG GQERATPKLV LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QVISQSSRGM 180 QVKDHILEAY HKFNPYGHLR HVDDNGSHFA SPPVLKQLPY DDFNANSSRI DNHGSNIRSS 240 HIFHVREAIT RDGPFRPSRF LEEKRWPPCE LIGNHMKGRR HLLNFTWGDI NNVPQPDNLV 300 WSAKASTINQ HQPNTRGPKF ISSSYEPLSQ LEVQKLQCIN GEMFQPKVGP NMKTMRQKTW 360 VPDLQLSLSH DFSNGSVVND SQESRKDFES MLSLSLSSSS ARQQEQSTAP TSRIRLSVSR 420 T

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLSGGPKEIY RRDMAPERIE ISDEDDQSSD ASYEIQAKND CLVSFQKCLF FDLNEEASTG  60
DDDQDVSSNE GTQAVGSRTS PEGNLSCNNT SVEGKERTIA VRQYVRSKMP RLRWTPDLHL  120
AFVHAVERLG GQERATPKLV LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QVISQSSRGM  180
QVKDHILEAY HKFNPYGHLR HVDDNGSHFA SPPVLKQLPY DDFNANSSRI DNHGSNIRSS  240
HIFHVREAIT RDGPFRPSRF LEEKRWPPCE LIGNHMKGRR HLLNFTWGDI NNVPQPDNLV  300
WSAKASTINQ HQPNTRGPKF ISSSYEPLSQ LEVQKLQCIN GEMFQPKVGP NMKTMRQKTW  360
VPDLQLSLSH DFSNGSVVND SQESRKDFES MLSLSLSSSS ARQQEQSTAP TSRIRLSVSR  420
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-39	G2-like family protein