PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g170290.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1235aa MW: 137522 Da PI: 6.4794

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g170290.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.4e-08	1131	1179	2	47
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+++++d vk ++ W+ I + ++ ++++ +++s+++++ Pd.00g170290.m01 1131 LSWTAEEEKKFKDIVKSNPPSlgitFWDQIFKSFP-KKSRRELVSYYFNV 1179 58***************88**********.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1235 aa Download sequence
MIKISSGTLQ ENDAAKAEAS AGFLPRQPAE LQSPTLTIDE VSAMETADLH HAPPALIGSS 60 DGDYPPIRSF TDAKVICYLE TTKLWTIAGP IAFNILCNYG INSFTNIFVG HIGNVELSAV 120 AISLSVIANF SFGFLLGMAS ALETLCGQAF GAGQVDMLGV YMQRSWLILF ATCFALLPLY 180 VYSAPVLKLL GQEDDIADLA GKFSIQTIPQ MFSLAINFPT QKFLQAQSRV QVLAWIGFAA 240 LIIHIGILYL FIKVFGWGTS GAAVAYDISA WGMAIAQVVY IVYWCNDGWK GLSWLAFKEL 300 WSFAKLSIAS AVMLCLEIWY FMTIIVLTGH LDNPVIAVGS LSICMNVNGW EGMLFIGINA 360 AISVRVSNEL GSAHPRAAKY SVIIIILESL LIGLFFAVVI LAAKDHFAII FTDSKEMQQA 420 VSRLAFLLSV TMLLNSVQPV ISGVAVGGGW QAMVAYINLF CYYVIGLPFG FLLGYKTSLR 480 VEGIWIGMIF GTLLQTIILL CIVYKTNWNK EDTTTHQRVI SHQNQNAKTP TKKYKSSTGW 540 SMVADGSALD CAKTPKKNET DGFSVDLEPP SEAPERCVLD VPHKLRCWFD QLLGVFLKEI 600 SAQGLLRPLP PMIGNGQRVD LLKLFWVVRK RGGFDTISKI RVWDSVAKEC GLGWGLGWAL 660 KLVYVKYLHL LERVIENKAL EWSVDISGLD LTEQFMDLED KLTKVFPEIS NQKVKDGGYP 720 HVELSPKNFK DSNEVGSEVA ESDRLKKSVV SEAFLDLDSR RDAGKFCNGD VPLSGGAMKC 780 TVNLMNKNLD LTNSMEDVGK VCDNGEVSEV GESGRGKKYN DCDEAVIIFD PSPGEVSSFR 840 KRKRGPSCGS EVGESCRGKK YNDISNEDAV ILDPSTDEEA NSFWKRKQES LCGMLNWVRM 900 IAKDPCDPAV GSLPERSKWK SFGNEENWMQ VLWAREAIFV KKHADSGAEQ SNWQKNQRMH 960 PSLYDDHFSS SYNLRERLRL EKKLLSGGTM PQSRTGSESS SPSYSPDMAG MEDQLLGNSD 1020 FTGVLDRYPP SHIPLGSNYQ AHLPEWTGEA SESELKWLGS RFWPLEKPEH RYLIERDPIG 1080 KGRQESCGCQ VSGSIECVRF HISEKRLRVK LELGPAFYHW EFNQMGEEVG LSWTAEEEKK 1140 FKDIVKSNPP SLGITFWDQI FKSFPKKSRR ELVSYYFNVF LLHRRGYQNR FTPNNIDSDD 1200 EGLESGSVTN GFGDEERKPS KSILKSPHKP HAKCR

Sequence ? help Back to Top

Protein Sequence Length: 1235 aa Download sequence

MIKISSGTLQ ENDAAKAEAS AGFLPRQPAE LQSPTLTIDE VSAMETADLH HAPPALIGSS  60
DGDYPPIRSF TDAKVICYLE TTKLWTIAGP IAFNILCNYG INSFTNIFVG HIGNVELSAV  120
AISLSVIANF SFGFLLGMAS ALETLCGQAF GAGQVDMLGV YMQRSWLILF ATCFALLPLY  180
VYSAPVLKLL GQEDDIADLA GKFSIQTIPQ MFSLAINFPT QKFLQAQSRV QVLAWIGFAA  240
LIIHIGILYL FIKVFGWGTS GAAVAYDISA WGMAIAQVVY IVYWCNDGWK GLSWLAFKEL  300
WSFAKLSIAS AVMLCLEIWY FMTIIVLTGH LDNPVIAVGS LSICMNVNGW EGMLFIGINA  360
AISVRVSNEL GSAHPRAAKY SVIIIILESL LIGLFFAVVI LAAKDHFAII FTDSKEMQQA  420
VSRLAFLLSV TMLLNSVQPV ISGVAVGGGW QAMVAYINLF CYYVIGLPFG FLLGYKTSLR  480
VEGIWIGMIF GTLLQTIILL CIVYKTNWNK EDTTTHQRVI SHQNQNAKTP TKKYKSSTGW  540
SMVADGSALD CAKTPKKNET DGFSVDLEPP SEAPERCVLD VPHKLRCWFD QLLGVFLKEI  600
SAQGLLRPLP PMIGNGQRVD LLKLFWVVRK RGGFDTISKI RVWDSVAKEC GLGWGLGWAL  660
KLVYVKYLHL LERVIENKAL EWSVDISGLD LTEQFMDLED KLTKVFPEIS NQKVKDGGYP  720
HVELSPKNFK DSNEVGSEVA ESDRLKKSVV SEAFLDLDSR RDAGKFCNGD VPLSGGAMKC  780
TVNLMNKNLD LTNSMEDVGK VCDNGEVSEV GESGRGKKYN DCDEAVIIFD PSPGEVSSFR  840
KRKRGPSCGS EVGESCRGKK YNDISNEDAV ILDPSTDEEA NSFWKRKQES LCGMLNWVRM  900
IAKDPCDPAV GSLPERSKWK SFGNEENWMQ VLWAREAIFV KKHADSGAEQ SNWQKNQRMH  960
PSLYDDHFSS SYNLRERLRL EKKLLSGGTM PQSRTGSESS SPSYSPDMAG MEDQLLGNSD  1020
FTGVLDRYPP SHIPLGSNYQ AHLPEWTGEA SESELKWLGS RFWPLEKPEH RYLIERDPIG  1080
KGRQESCGCQ VSGSIECVRF HISEKRLRVK LELGPAFYHW EFNQMGEEVG LSWTAEEEKK  1140
FKDIVKSNPP SLGITFWDQI FKSFPKKSRR ELVSYYFNVF LLHRRGYQNR FTPNNIDSDD  1200
EGLESGSVTN GFGDEERKPS KSILKSPHKP HAKCR