PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g169960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 649aa MW: 72779.1 Da PI: 4.8614 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.4 | 0.00014 | 465 | 498 | 17 | 55 |
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N+++ Lr+++P+ + ++Ka++L +++Y+k+L+ Pd.00g169960.m01 465 NEKLLVLRSMVPSiS------EVDKASVLDDTIKYLKELE 498 89999********66......8***************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 649 aa Download sequence |
MANGTQNHER VPENLRKQFA VAVRSIKWSY AIFWSLSTSQ QGVLEWCEGY YNGDIKTRKT 60 VEGVELKTDK MGLERNAQLR ELYKSLLEGE TEPQAKAPSA ALNPEDLSDA EWYYLLCMSF 120 VFNPGEGLPG RALANGQTIW LCDAQYADSK VFSRSLLAKS ASIQTVVCFP YQGGVVELGV 180 TELVPEDLSL IQHIKASLLD FSKPDCSEKS SSAPHKADDD SDQVLAKVDH EIVDTLALEN 240 LYSPSEEIKF DPMGINDLHG NHEEFNMDSP QECSNGCEHN HQTEDSFMPE GINDGASQVQ 300 SWHFMDEDFS IGVQDSMNSS DCISEAFVNK KRAHSSPRHE SVNRNHLKEL QNFNDTKFSS 360 LDLGPADDHI HYTRTLSNIL GSSTRLTENP CSCDGDCKSS FVTWKKGVVD NCRPTVHQKI 420 LKKILFTVPL MCGASSQNTI QDGLSKLQSD DIHKGHVMPD KLKENEKLLV LRSMVPSISE 480 VDKASVLDDT IKYLKELEAR TEEMESCMDT VEAIARRKYL DSAEKTSDNY DKINMDNVKK 540 PWLNKRKACD IDETDPDLNR LVPRESLPLD VKVILKEQEV LIEMRCPYRE YILLDIMDAI 600 NNLYLDAHSV QSSTLDGVLT LSLTSKFRGA AVAPVGMIKQ ALWKIAGKC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41315.1 | 1e-156 | bHLH family protein |