PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g169820.m03 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 595aa MW: 66362.7 Da PI: 9.6178 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.6e-18 | 51 | 97 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l++av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l Pd.00g169820.m03 51 KGGWTEEEDKILAHAVQKFNGRNWKKIAECVT-DRTDVQCLHRWQKVL 97 688****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 103 | 149 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+l++++v + G++ W+ Ia+ ++ gR +kqc++rw+++l Pd.00g169820.m03 103 KGFWSKEEDDLIIELVMKQGNKKWSEIAKSLP-GRIGKQCRERWHNHL 149 688*****************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 49.1 | 1.3e-15 | 155 | 197 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ E++ l++a+k +G++ W+ Ia+ + gR+++++k++w+ Pd.00g169820.m03 155 RTAWTKAEELTLIEAHKIYGNK-WAEIAKFLH-GRSENSIKNHWN 197 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 595 aa Download sequence |
MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG RMAGPIRRST KGGWTEEEDK 60 ILAHAVQKFN GRNWKKIAEC VTDRTDVQCL HRWQKVLNPD LVKGFWSKEE DDLIIELVMK 120 QGNKKWSEIA KSLPGRIGKQ CRERWHNHLN PDIKRTAWTK AEELTLIEAH KIYGNKWAEI 180 AKFLHGRSEN SIKNHWNSSV KKKLELRSSH TSDMGTQNIK SESRKRAVVK QGLDQRANME 240 RNVETCSLDL NLVLGTANRR ESQMQSSDKG NCGWLTKGAA ANKMMKTPPR TVFYDRAAAA 300 CGLNIEQCQE TSSNCGRLRD SHNVTANNHY NNICNAAPDY LGFPFSHTRN HKPSDPIHLL 360 PSRPLPRPPQ ASLNAGLGVP GCKRTAGYFI NKPVLPVTAQ GLYESSSGPQ AYEKKKDSGA 420 PVNSKNSSHG RLCYRPFQLE DVEFYLENGE FPSTDSYIQT ECSSVSFCTP TSHDTRIFVD 480 CNSPDSTLRS AARTFEKSPS IIRKRRHSVS RKSVNAANHG DSVCSKEISN NFRNSPHLLG 540 LSPCGRTNSS SMVHSPPRSQ KFGDSAVMKS VEKRLEHAFD VEWDSASAVS RTLSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 1e-86 | MYB family protein |