PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g169820.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 519aa MW: 58085.4 Da PI: 9.6994

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g169820.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	27	73	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+l++++v + G++ W+ Ia+ ++ gR +kqc++rw+++l Pd.00g169820.m02 27 KGFWSKEEDDLIIELVMKQGNKKWSEIAKSLP-GRIGKQCRERWHNHL 73 688***************************.***********97 PP
2	Myb_DNA-binding	49.4	1.1e-15	79	121	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ E++ l++a+k +G++ W+ Ia+ + gR+++++k++w+ Pd.00g169820.m02 79 RTAWTKAEELTLIEAHKIYGNK-WAEIAKFLH-GRSENSIKNHWN 121 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MTSLSLYITD VQCLHRWQKV LNPDLVKGFW SKEEDDLIIE LVMKQGNKKW SEIAKSLPGR 60 IGKQCRERWH NHLNPDIKRT AWTKAEELTL IEAHKIYGNK WAEIAKFLHG RSENSIKNHW 120 NSSVKKKLEL RSSHTSDMGT QNIKSESRKR AVVKQGLDQR ANMERNVETC SLDLNLVLGT 180 ANRRESQMQS SDKGNCGWLT KGAAANKMMK TPPRTVFYDR AAAACGLNIE QCQETSSNCG 240 RLRDSHNVTA NNHYNNICNA APDYLGFPFS HTRNHKPSDP IHLLPSRPLP RPPQASLNAG 300 LGVPGCKRTA GYFINKPVLP VTAQGLYESS SGPQAYEKKK DSGAPVNSKN SSHGRLCYRP 360 FQLEDVEFYL ENGEFPSTDS YIQTECSSVS FCTPTSHDTR IFVDCNSPDS TLRSAARTFE 420 KSPSIIRKRR HSVSRKSVNA ANHGDSVCSK EISNNFRNSP HLLGLSPCGR TNSSSMVHSP 480 PRSQKFGDSA VMKSVEKRLE HAFDVEWDSA SAVSRTLSP

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MTSLSLYITD VQCLHRWQKV LNPDLVKGFW SKEEDDLIIE LVMKQGNKKW SEIAKSLPGR  60
IGKQCRERWH NHLNPDIKRT AWTKAEELTL IEAHKIYGNK WAEIAKFLHG RSENSIKNHW  120
NSSVKKKLEL RSSHTSDMGT QNIKSESRKR AVVKQGLDQR ANMERNVETC SLDLNLVLGT  180
ANRRESQMQS SDKGNCGWLT KGAAANKMMK TPPRTVFYDR AAAACGLNIE QCQETSSNCG  240
RLRDSHNVTA NNHYNNICNA APDYLGFPFS HTRNHKPSDP IHLLPSRPLP RPPQASLNAG  300
LGVPGCKRTA GYFINKPVLP VTAQGLYESS SGPQAYEKKK DSGAPVNSKN SSHGRLCYRP  360
FQLEDVEFYL ENGEFPSTDS YIQTECSSVS FCTPTSHDTR IFVDCNSPDS TLRSAARTFE  420
KSPSIIRKRR HSVSRKSVNA ANHGDSVCSK EISNNFRNSP HLLGLSPCGR TNSSSMVHSP  480
PRSQKFGDSA VMKSVEKRLE HAFDVEWDSA SAVSRTLSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-61	MYB family protein