PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g165800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 108aa    MW: 12896 Da    PI: 9.7122
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g165800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.92.4e-10489185
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld 85
                      f+k+ltpsdv+++  l++ +  +e   +++++ +  l++ de g+++ ++l+ r ++++  ++ +k Wk Fvk+ g+ +gD++ F ++
  Pd.00g165800.m01  4 FEKELTPSDVNQR--LTVARGMLEFLpQIDPAHDLPLRVLDEMGKVYVFYLSGREGREKkpVFQAKHWKVFVKERGIAAGDVMYFWRE 89
                      99********976..9*****997779889999999***************87666666878888*******************9843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MNRFEKELTP SDVNQRLTVA RGMLEFLPQI DPAHDLPLRV LDEMGKVYVF YLSGREGREK  60
KPVFQAKHWK VFVKERGIAA GDVMYFWREE NVFYQTEYRI ALLKPLFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.18e-07B3 family protein