PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g165580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 288aa MW: 30982.4 Da PI: 6.6832 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.1 | 9.9e-11 | 172 | 219 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq Pd.00g165580.m01 172 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 219 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MDPPTLVNEC SFSNANATSF NLSEIWQFPM SGGGGASGGD SGGGGALGLR RPNFAQSFAQ 60 FGDVSGAIRD VLAGSDPNPM SLDVRGSHGG GAARKRLDAE DDSPKSSGHI GGSDCDGKRL 120 KPAARSRDET RESKAEAETS SGKPVEQSTQ PPDPPKQDYI HVRARRGQAT DSHSLAERAR 180 REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE TVNTRMNPGI 240 EVFPSKDFGQ QAFDTAAMAF GTQPPREYSR GSSPEWLHMQ VGGGFERT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 1e-97 | bHLH family protein |