PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g165580.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 288aa    MW: 30982.4 Da    PI: 6.6832
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g165580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.19.9e-11172219455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Pd.00g165580.m01 172 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 219
                       8*************************9....677*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDPPTLVNEC SFSNANATSF NLSEIWQFPM SGGGGASGGD SGGGGALGLR RPNFAQSFAQ  60
FGDVSGAIRD VLAGSDPNPM SLDVRGSHGG GAARKRLDAE DDSPKSSGHI GGSDCDGKRL  120
KPAARSRDET RESKAEAETS SGKPVEQSTQ PPDPPKQDYI HVRARRGQAT DSHSLAERAR  180
REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE TVNTRMNPGI  240
EVFPSKDFGQ QAFDTAAMAF GTQPPREYSR GSSPEWLHMQ VGGGFERT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-97bHLH family protein