PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g165130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 265aa MW: 29499.3 Da PI: 7.5785 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.1 | 0.00029 | 85 | 107 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H Pd.00g165130.m01 85 FECQYCFKEFANSQALGGHQNAH 107 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MEKGHDQDLD QSHAYSAGSC VEKKLRLFGF ELSPSKNEDS SIKGSAEGDE SVNSSNSISY 60 GREVHMNKPA SNEKSSTSEA DDKKFECQYC FKEFANSQAL GGHQNAHKKE RMKKKRLQLQ 120 ARKASINFYL QPFQTNNLGN GLAFQRGSSP SSWFYDPSSY VVNPDQFTLH EEAQISFNPF 180 DQNGSSGSQV SNWYALPHQF SSQTDEQDAS NNKFTLTQTD RSGESRPVVF KPSPLSASTQ 240 SCKPLDLQLG LGLPSKIRRS SRSEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 7e-17 | C2H2 family protein |