PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g160690.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 320aa    MW: 34564.6 Da    PI: 7.1927
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g160690.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA38.44.1e-121511733658
         CBFB_NFYA  36 kpylheSRhkhAlrRpRgsgGrF 58 
                        pylheSRh hAlrR+Rg+gGrF
  Pd.00g160690.m01 151 MPYLHESRHLHALRRARGCGGRF 173
                       69********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MMPAKSKDED PHIEHGAQTV LESAIYAQPW WRGVGNNSSS GESAPASSLV DHCDSMVMNG  60
AMQSQANARL DGGANFNKEL RTTVGSQSDQ KNGCKNQQIK SVSSSVVPTM GEHLDPNSQM  120
ELVGHSIVLT SYPYSDPQYG RMLTPYGAQA MPYLHESRHL HALRRARGCG GRFLNTKKQD  180
DNDENSSVEK GMHLDANDSA QSAKSSFECF PNTSNGTFDS SNVQQEGSDP WFRAHKNHTL  240
SGDNGNGHGP SSAYPSTFLY EVKLKACAVS LGVKPCCAMS ISGKSFLALV TSVIIGVLWK  300
EIGVKSMLSS VSRHLHSLVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.18e-18NF-YA family protein