PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g160170.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 281aa    MW: 31992.4 Da    PI: 10.4035
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g160170.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.32.5e-1529121186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W+++ + +Liea  e++ +l+ g+l++++Weev++++            +r+ +qCk++ + l+k+yk +k++ ++ + + +s +p+f+ l+
  Pd.00g160170.m02  29 CWSEDATFTLIEAWGERHLSLNHGNLRQKHWEEVADAVnashvtaDNPRSRRTDVQCKNRVDTLKKKYKIEKARVSDSNGDYTSPWPFFSLLD 121
                       7*************************************99999966666789************************99999999*****9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDFVAGSPSP VTVPRPPSKT ASVPVREDCW SEDATFTLIE AWGERHLSLN HGNLRQKHWE  60
EVADAVNASH VTADNPRSRR TDVQCKNRVD TLKKKYKIEK ARVSDSNGDY TSPWPFFSLL  120
DSLIGSKFPK PSPPLPRRCS PSPPLPRRSP PSPPLQWTFP VARRSATVKR PAPAFFPAPG  180
DEPSEESEGS PSRSSVGGSR MRDRDREVGC VELAMAIERF AEIYERVEQR KQRQMVELEK  240
QRMQFAKDLE YHRMQLFMET TKHQLRKIKR AKRSSSSPAL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-66Trihelix family protein