PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g157580.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 271aa    MW: 29927.6 Da    PI: 7.7996
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g157580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.1e-29118177159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  Pd.00g157580.m01 118 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHS 177
                       58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDYSSAAYDD TSLDLNTKPL RLFDDTPIEK EMQSKILIDF GRQLSANEES GALLEELQRV  60
SAENKKLTEM LTVMVNGNSE SSSSDGESCK KPREETIKAK ISRAYVRTEP SDTTSLVVKD  120
GYQWRKYGQK VTRDNPCPRA YFKCSFAPSC PVKKKVQRSV EDQSILVATY EGEHNHSHPS  180
QIEATSGSNR CMTLGSVPCS TSLASSGPTI TLDLTKSKSS ADTKSTKTRT ETPEVRKFLV  240
EQMASSLTKD PDFTKALAAA ISGRILQHNS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-73WRKY family protein