PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g157580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 271aa MW: 29927.6 Da PI: 7.7996 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.9 | 1.1e-29 | 118 | 177 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ Pd.00g157580.m01 118 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHS 177 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MDYSSAAYDD TSLDLNTKPL RLFDDTPIEK EMQSKILIDF GRQLSANEES GALLEELQRV 60 SAENKKLTEM LTVMVNGNSE SSSSDGESCK KPREETIKAK ISRAYVRTEP SDTTSLVVKD 120 GYQWRKYGQK VTRDNPCPRA YFKCSFAPSC PVKKKVQRSV EDQSILVATY EGEHNHSHPS 180 QIEATSGSNR CMTLGSVPCS TSLASSGPTI TLDLTKSKSS ADTKSTKTRT ETPEVRKFLV 240 EQMASSLTKD PDFTKALAAA ISGRILQHNS Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-73 | WRKY family protein |