PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g156130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 233aa MW: 25374.1 Da PI: 4.7857 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 74.7 | 1.1e-23 | 76 | 119 | 2 | 44 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaed 44 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ + Pd.00g156130.m01 76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSQPE 119 69*************************998***********965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MDPKFYRISP FGTDPADPDQ PMTSENGPGS PSSGEETKVA TAPSPKKRRG VQKRVVTVPI 60 GDVEGSKSKG EGHPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSQPEL 120 PAKTVTPNDE ELTIFASQVD LDLSDDSATL LSAFGWFSDV ASTTVLESPI CAGNSSCADY 180 DVATRLGDEE DEYLFADLGE LPEGSVIFRH KMVESDEQNR RCSLSVVPCC NSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 2e-48 | WRKY family protein |