PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g154200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1089aa MW: 121801 Da PI: 5.9496

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g154200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	185.3	6.4e-58	21	136	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e ++rwl++ ei++iL nf+k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq Pd.00g154200.m01 21 EaQHRWLRPAEICEILSNFQKFHISSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 113 449**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+yw+Le++l +iv+vhylevk Pd.00g154200.m01 114 RRSYWMLEQDLMHIVFVHYLEVK 136 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1089 aa Download sequence
MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT 180 SPSSNLTSCE DADSGDSRQA SSFQSSFHSQ QMGNGPLTDK ADINLSLHPH LNNHDGPSSF 240 HGGNYRPYFE KDQQCYSDDS TCGIDSQKTL GVGSWEEILE QCTTGLHTVT SHGSKSSIQI 300 ASAGIPPEQQ NITSTEFLAG NSTLKEEFGI PLPFRTNWQI PLEENALQLP KWPLDQSMNL 360 QLPSNLDTRL FEQGTVDVNL RNVPELVTTH PNQRNDQLVQ NNFQAQLTNA ESQCLIIPSS 420 EPDIPKDGNI NYAFTLRQQL LDREEGLKKV DSFSRWVSKE LGEVDDLQMQ SSSGISWSTD 480 ECGNVADDSS LSPSISQDQL FSIVDFSPKW AYTDSEIEVL VIGTFLVSQK DVTKYNWSCM 540 FGEVEVPAQV LANGVLFCFA PPHSAGQVPF YVTCSNRLAC SEVREFEYQV GSTKDLDITN 600 ICNATTNDIH LHLRLESLLS LRSVSPSGQL VEGVKEKQNL ISKIISLKEE EEYLPLVEPT 660 AVNDLLQHEG MEHLIKLMKE KLYSWLLHKA IEDGKGPSVL DSEGQGVIHL AAALGYDWAI 720 KPIVTAGVSI NFRDVNGWTA LHWAAFYGRE QTVAILISLG AAPGALTDPS PEFPLGRAPA 780 DLASVNRHKG ISGFLAESSL TSYLDSLTMN DAKEGGAAEI SGIRAVKTFS ERIATPGSYS 840 DMPDALSLKD SLTAVTNATQ AADRIHQMFR MQSFDRRQLT EYDTDEXXXX GMPDERAISL 900 IASKSHKVGP VNGHTAAIQI QKKFRGWKKR KEFLIIRQRI VKIQAHVRGH QVRKQYKAIT 960 WSVGILEKVI LRWRRKGTGL RGFRPDAVAK APNLQSVPSK DDDYDFLKKG RKQTEERLQK 1020 ALTRVKSMVQ YPEGRAQYRR LLNVVEGFRE TKVSDMATDG SELKVEGGDD LIDIDKLLDD 1080 DTFMSIAFD

Sequence ? help Back to Top

Protein Sequence Length: 1089 aa Download sequence

MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML  120
EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT  180
SPSSNLTSCE DADSGDSRQA SSFQSSFHSQ QMGNGPLTDK ADINLSLHPH LNNHDGPSSF  240
HGGNYRPYFE KDQQCYSDDS TCGIDSQKTL GVGSWEEILE QCTTGLHTVT SHGSKSSIQI  300
ASAGIPPEQQ NITSTEFLAG NSTLKEEFGI PLPFRTNWQI PLEENALQLP KWPLDQSMNL  360
QLPSNLDTRL FEQGTVDVNL RNVPELVTTH PNQRNDQLVQ NNFQAQLTNA ESQCLIIPSS  420
EPDIPKDGNI NYAFTLRQQL LDREEGLKKV DSFSRWVSKE LGEVDDLQMQ SSSGISWSTD  480
ECGNVADDSS LSPSISQDQL FSIVDFSPKW AYTDSEIEVL VIGTFLVSQK DVTKYNWSCM  540
FGEVEVPAQV LANGVLFCFA PPHSAGQVPF YVTCSNRLAC SEVREFEYQV GSTKDLDITN  600
ICNATTNDIH LHLRLESLLS LRSVSPSGQL VEGVKEKQNL ISKIISLKEE EEYLPLVEPT  660
AVNDLLQHEG MEHLIKLMKE KLYSWLLHKA IEDGKGPSVL DSEGQGVIHL AAALGYDWAI  720
KPIVTAGVSI NFRDVNGWTA LHWAAFYGRE QTVAILISLG AAPGALTDPS PEFPLGRAPA  780
DLASVNRHKG ISGFLAESSL TSYLDSLTMN DAKEGGAAEI SGIRAVKTFS ERIATPGSYS  840
DMPDALSLKD SLTAVTNATQ AADRIHQMFR MQSFDRRQLT EYDTDEXXXX GMPDERAISL  900
IASKSHKVGP VNGHTAAIQI QKKFRGWKKR KEFLIIRQRI VKIQAHVRGH QVRKQYKAIT  960
WSVGILEKVI LRWRRKGTGL RGFRPDAVAK APNLQSVPSK DDDYDFLKKG RKQTEERLQK  1020
ALTRVKSMVQ YPEGRAQYRR LLNVVEGFRE TKVSDMATDG SELKVEGGDD LIDIDKLLDD  1080
DTFMSIAFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein