PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g152200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 813aa MW: 89101.8 Da PI: 7.4857

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g152200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	627	664	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + Pd.00g152200.m01 627 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 664 664459******************************87 PP
2	BELL	111.5	4.7e-36	476	544	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl ++eeV++rYkqy++q+q+v+ssFe vagl sa+pY+s+Al+++SrhFrcL +ai++q+ Pd.00g152200.m01 476 EYQQKKAKLLYMQEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYISMALNTVSRHFRCLTNAIKDQL 544 789***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
MEMSGFRPEL HVAQQSRRDK LRVHQTSSPP HHLDSEKLPL HPGLNPDIVQ VRNVRNANLL 60 YDPTVFSSEM LNFSINTNAL SGQGSGESEN FGNWRSLNPP QSLDWVTNYT SGSVGSGSNN 120 QNHMFGSREA NNNMSPSTPH LLKPSSFHGY QDVQSSLANQ SAEISSHHVS QKHLGTMHFS 180 SPPLNYLNTL QDVVTSASTG GQDQLEMASL VQQRILENEL VLLPSYVNQS NALRFDNASS 240 NSWMNRQPVE NRHHWSSGGG GMGFSTAKNV DEDMRNGMSN DSNQQGLSLS LSSNPPSNNK 300 LPAAQFGSQD LHASSHDDHA FKDVQSPKTG KSSADYLCSI TKPSIISKAC GKSLQDIVGT 360 STSASRSTGP LGPFTGYATI LKSSKFLKPA QQLLDEFCRN SDSKLTKTRE ASERMSGDVS 420 ASASVSVSTD AANAVETEAV AKGNNSGASS STFYGSNEIT SDGGAASISS GSFGPEYQQK 480 KAKLLYMQEE VCRRYKQYHQ QMQMVVSSFE SVAGLSSATP YISMALNTVS RHFRCLTNAI 540 KDQLKHIRKA LGEEYLSSAI TTGTTGCSSS KGDKNLAKLK FMGLGFQKHN KSGGGAHLGF 600 SEPQQHVWRP QRGLPERSVA ILRAWLFEHF LHPYPTDTDK HMLATQTGLS RNQVSNWFIN 660 ARVRVWKPMV EEIHMLETRG GSVEASQDPT KKDGNSLTEG TSSRPDNEHQ LGMNNMMHDR 720 QLECSGDEEQ QYQEIKRSRM ECQVPSSMDG GLMGFVPYQR SGLEVGGLGA VSLTLGLRHG 780 VESAQQQQQQ QLQQQEDQLR RQLGSQMIRD FVG

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

MEMSGFRPEL HVAQQSRRDK LRVHQTSSPP HHLDSEKLPL HPGLNPDIVQ VRNVRNANLL  60
YDPTVFSSEM LNFSINTNAL SGQGSGESEN FGNWRSLNPP QSLDWVTNYT SGSVGSGSNN  120
QNHMFGSREA NNNMSPSTPH LLKPSSFHGY QDVQSSLANQ SAEISSHHVS QKHLGTMHFS  180
SPPLNYLNTL QDVVTSASTG GQDQLEMASL VQQRILENEL VLLPSYVNQS NALRFDNASS  240
NSWMNRQPVE NRHHWSSGGG GMGFSTAKNV DEDMRNGMSN DSNQQGLSLS LSSNPPSNNK  300
LPAAQFGSQD LHASSHDDHA FKDVQSPKTG KSSADYLCSI TKPSIISKAC GKSLQDIVGT  360
STSASRSTGP LGPFTGYATI LKSSKFLKPA QQLLDEFCRN SDSKLTKTRE ASERMSGDVS  420
ASASVSVSTD AANAVETEAV AKGNNSGASS STFYGSNEIT SDGGAASISS GSFGPEYQQK  480
KAKLLYMQEE VCRRYKQYHQ QMQMVVSSFE SVAGLSSATP YISMALNTVS RHFRCLTNAI  540
KDQLKHIRKA LGEEYLSSAI TTGTTGCSSS KGDKNLAKLK FMGLGFQKHN KSGGGAHLGF  600
SEPQQHVWRP QRGLPERSVA ILRAWLFEHF LHPYPTDTDK HMLATQTGLS RNQVSNWFIN  660
ARVRVWKPMV EEIHMLETRG GSVEASQDPT KKDGNSLTEG TSSRPDNEHQ LGMNNMMHDR  720
QLECSGDEEQ QYQEIKRSRM ECQVPSSMDG GLMGFVPYQR SGLEVGGLGA VSLTLGLRHG  780
VESAQQQQQQ QLQQQEDQLR RQLGSQMIRD FVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	1e-89	TALE family protein