PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g152070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 529aa MW: 60463.5 Da PI: 8.7748

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g152070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	359	407	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v q G g+W++ r + +Rt+ ++k++w+++l Pd.00g152070.m01 359 SWTSSEVMKLIEGVSQCGVGRWSAMKRLLFsscSHRTAVDIKDKWRNLL 407 6*********************888887***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MFQGMDNAVC HGRISLPTSQ EYLCEAKHSD KVFKLEGGPD SCLQNAGLES HSPGVYKEYC 60 GAEMADLSCE STPRLGYKDN RSSLLLDHMS VQERKLVFRN MFRYETPIID EQWPKHSISP 120 GLQNFFELES DSNLTECGLM TKKNEGKTVL SSSIEFFGKD TSTIRGSLSD EGMSRDLQVK 180 WKKLADLESL KTSNSRVSEI ELCSSDERDK AGAFAMQKRS RRPPRRYIEE LAQSKSKFYS 240 RKCGVACKRS KNSFLHVRSD KNNRQKETQE ETLLCQDRSY EVGCIQVPFG LPVEAGQLEE 300 HNSSLNSEDC KEDHKLLRSS EKLEIEYSPA KSREEISDDE CVLRRSTQKG SKQIKHYTSW 360 TSSEVMKLIE GVSQCGVGRW SAMKRLLFSS CSHRTAVDIK DKWRNLLKAS CTQLQKERKI 420 KRDISKQASD HVPESVLQRV RELAVIYPYP RRKRSACNTH AMSSFATEEC NALPPQRENS 480 LLETSVNFTI HIKREISKRA SDRVPESVSQ CVRELAVIYP YPRRKKVRS

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MFQGMDNAVC HGRISLPTSQ EYLCEAKHSD KVFKLEGGPD SCLQNAGLES HSPGVYKEYC  60
GAEMADLSCE STPRLGYKDN RSSLLLDHMS VQERKLVFRN MFRYETPIID EQWPKHSISP  120
GLQNFFELES DSNLTECGLM TKKNEGKTVL SSSIEFFGKD TSTIRGSLSD EGMSRDLQVK  180
WKKLADLESL KTSNSRVSEI ELCSSDERDK AGAFAMQKRS RRPPRRYIEE LAQSKSKFYS  240
RKCGVACKRS KNSFLHVRSD KNNRQKETQE ETLLCQDRSY EVGCIQVPFG LPVEAGQLEE  300
HNSSLNSEDC KEDHKLLRSS EKLEIEYSPA KSREEISDDE CVLRRSTQKG SKQIKHYTSW  360
TSSEVMKLIE GVSQCGVGRW SAMKRLLFSS CSHRTAVDIK DKWRNLLKAS CTQLQKERKI  420
KRDISKQASD HVPESVLQRV RELAVIYPYP RRKRSACNTH AMSSFATEEC NALPPQRENS  480
LLETSVNFTI HIKREISKRA SDRVPESVSQ CVRELAVIYP YPRRKKVRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	4e-28	MYB_related family protein