PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g150560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 243aa MW: 25115.4 Da PI: 8.6378 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 63.7 | 3.1e-20 | 2 | 47 | 15 | 59 |
-TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 15 vkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pd.00g150560.m01 2 AKGNPCPRAYYRCTMAsGCPVRKQVQRLAEDKTILITTYEGNHSHP 47 59*************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MAKGNPCPRA YYRCTMASGC PVRKQVQRLA EDKTILITTY EGNHSHPLPP AATAMANTTS 60 AAAAMLLSAS APFPTITLDL TQSPMQQFHR IPPPSSSTFP LPLHGYHQLM GGPGHPIPGP 120 TYFPPNYKAP PPPAGVSLGG QRSTSTHASG MIETVSAAIA SDPNFTAALA EAISTIMGAP 180 RPHQGHQGGI NINDGEIANN NAARGLVAST NNSPPSANIG LPPGSLQPGS PQLPQSCTTF 240 STN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 2e-25 | WRKY family protein |