PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g150100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 298aa    MW: 32455.8 Da    PI: 9.5555
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g150100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.81.7e-31226283359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  Pd.00g150100.m01 226 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 283
                       99************************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAVELMMGFI DSFAAQMEEN AVKEAASAGI QSVEKFISLI SQHHHQFQDS SFSSSSNPEA  60
ATEYKAVADM AVNKFRKVYC PTPSVRLPPL PHNPHLKTTP VVLTKSVGCA ERKLDAPTTI  120
NFSPSPSISA ANSFMSSLTT GDAEGSVQHS MSSGFQFTNM SQSSSGKPPR SSSSLKRKCN  180
SMDDVAALRC GSSSGRCHCS KKRKSKVKRV VRVPAISMKM ADIPPDDYSW RKYGQKPIKG  240
SPHPRGYYKC SSQRGCLARK HVERALDDPT MLIVTYEGDH NHSHSVTDPT PAIVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-56WRKY family protein