PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g149890.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 30149.4 Da PI: 7.7913 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.4 | 2.2e-12 | 70 | 117 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f+ L llP++ K K++i+ +Av+YIksL+ Pd.00g149890.m01 70 MHTWTERERRKKMRDMFSSLHALLPQL----PAKAYKSTIVDEAVRYIKSLE 117 57788*********************6....399****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MSCLQQNSVL GSPNSNLGTC GGGELLKLEK MGVNVNSYRN SSSALMEKGV IKESSGKSAS 60 GGGNESEHGM HTWTERERRK KMRDMFSSLH ALLPQLPAKA YKSTIVDEAV RYIKSLEKTL 120 QTKQKQKLDK LQRQSTSALI ASNTELAGET REAFLADHLH PSKNLMVTNA FPASLSPACF 180 ETWFSPTVVV NICGPDAQFS VCSPRKPGLL TTILYILEKH ELDVVSAHIS SDQYRCMYMI 240 HAHAGGACDH FPEALSVEDT FKLAAGEINL WLLSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 6e-40 | bHLH family protein |