PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g148530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 948aa    MW: 104537 Da    PI: 7.1309
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g148530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.4e-19129187357
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                       k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Pd.00g148530.m01 129 KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 187
                       5679*****************************************************97 PP
2START183.98.9e-582734812205
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+s+g  g+++
  Pd.00g148530.m01 273 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRNCRSVDVLNVLSTGngGTIE 364
                       7899******************************************************.8888888888************************ PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++l
  Pd.00g148530.m01 365 LLYMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL 457
                       *********************************************9988899***************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXXX CS
             START 182 rslvksglaegaktwvatlqrqce 205
                       r+l++s++  ++kt++a+l+++++
  Pd.00g148530.m01 458 RPLYESSTLLAQKTTMAALRNLRQ 481
                       ********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 948 aa     Download sequence    
MVKHEMRWGG GEEHVVKLRR SLHACGGHIY FGSTRVDHTQ IWSAGVDHTL HTNRHMSASD  60
RPRLFTLKKN SHNFGGTLLY PTTGSGGLLG IKQSFLANQN VRRPILVGMM AVTSACKDGG  120
MKMQMDNGKY VRYTPEQVEA LERLYHECPK PSSMRRQQLI RECPILSNIE PKQIKVWFQN  180
RRCREKQRKE ASRLQTVNRK LTAMNKLLME ENDRLQKQVS QLVYENSYFR QQTQNTNLAT  240
TDTSCESVVT SGQHHLTPQH PPRDASPAGL LSIAEETLAE FLSKATGTAV EWVQMPGMKP  300
GPDSIGIVAI SHGCTGVAAR ACGLVGLEPT RVAEILKDRP SWFRNCRSVD VLNVLSTGNG  360
GTIELLYMQL YAPTTLAPAR DFWLLRYTSV LEDGSLVVCE RSLNNTQNGP SMPPVQNFVR  420
AEMLPSGYLI RPCEGGGSII HIVDHMDLEP WSVPEVLRPL YESSTLLAQK TTMAALRNLR  480
QISQEVSQPN AAGWGRRPAA LRALSQRLSK GFNEAVNGFT DEGWSILESD GVDDVTLLVN  540
SSPGKMMGAN LYANGVPSMS NAVLCAKASM LLQNVPPAIL LRFLREHRSE WADRSIDAYS  600
AAAIKPGPCG LLGSRAGSFG DQVIHPLAHT IEHEEFMEVI KIENMGHYRE DMIMPAADIF  660
LLQLCSGVDE NSVGTCAELV FAPIDASFSD DGPILPSGFR IIPLDSRMDA PSPNRTLDLA  720
SALEVGPAGS RASGDNAGHS GNTKSVMTIA FQFAFEIHLQ DNVASMARQY VRSIIASVQR  780
VALALSPSRF GSNSGFRPPP GTPEAQTLAG WICQSYRCYL GEDLLKSEGS ESILKSLWHH  840
SDAILCCSLK ALPVFTFANQ AGLDMLETTL VALQDITLEK IFDDNGRKTL FSEFPQIMQQ  900
GFMCLQGGIC MSSMGRPISY ERAVAWKVLN EEETAHCICF MFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein