PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g146190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 168aa    MW: 18861.8 Da    PI: 6.5208
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g146190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB166.14.4e-5223119197
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       ++eqd++lPianv+rimk++lPanakisk+aket+qecvsefisfvtseas+kc++e+rkt+ngdd+ wal+ lGf+dy  pl+ +l++yre 
  Pd.00g146190.m01  23 MKEQDQLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDVSWALGALGFDDYTGPLRRFLHRYREQ 115
                       589****************************************************************************************** PP

             NF-YB  94 egek 97 
                       ege+
  Pd.00g146190.m01 116 EGER 119
                       *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MVDNNNNIGA SGAANHDEDG AMMKEQDQLL PIANVGRIMK QILPANAKIS KEAKETMQEC  60
VSEFISFVTS EASEKCRKER RKTVNGDDVS WALGALGFDD YTGPLRRFLH RYREQEGERI  120
SSSANNNKSE NNQDKANNNT EDQQQRILLN HPHIQRPNFN KGSNTTGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.14e-56NF-YB family protein