PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g146060.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1156aa MW: 128953 Da PI: 8.8957

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g146060.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.1e-09	30	65	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g146060.m02 30 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 65 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1156 aa Download sequence
MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVRHR 60 SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTDHYCILG GSDSEQENNE DAETSRKPQK 120 HARSKLRSES SKGLEGHIPD FSESHPMAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY 180 SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT 240 TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG 300 TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD TKVVKSARSF 360 YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK 420 GSRPIPGVEH AAFKTSKLGK LGEGVHQSNS GLQKGKQKSL SFKIYNEAQT DCYASDNEKI 480 EATVEVKKSA SKGKRSSHYT THPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVPSAN 540 PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFCNRELNIK EKLSSCLSRY 600 QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE 660 QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI 720 VLTVDHSRCS VQFDQPELGV EHIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELKI 780 NEQLKEGTTK GYMKISSSDK LVSTGVPGYI LPSNHRINKS SKQTGVKSSS FNVQAKVGPG 840 ETASTQVANY QPSIPAQTQA KEADVQAIYE LTRALDKKEA VVSELRRMND EVFENQRDED 900 NSIRDSEPFK KEYAAVLLQL SQVNDQVSSA LLCLRQRNTY RGSSPHTVVK PMDNLSGPGS 960 HSNSYGYSCD VQESASHMRE IVESSRAKAH KMVDAAMQAF SSLRKENNFD KIEEVIDFVS 1020 NRLSDDAGML AMGSSTTPAD PIPFSQDQLT SWTSKPLATG CAHDPPKSNN LSNQSKEKLL 1080 SDLIVNCVAA FMMIQTCTAR QFPPADVAQV LDHAVTSLQP FCPQNLSVYG EIQKCTGIIR 1140 NQIMALVPTL SLCPNM

Sequence ? help Back to Top

Protein Sequence Length: 1156 aa Download sequence

MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVRHR  60
SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTDHYCILG GSDSEQENNE DAETSRKPQK  120
HARSKLRSES SKGLEGHIPD FSESHPMAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY  180
SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT  240
TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG  300
TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD TKVVKSARSF  360
YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK  420
GSRPIPGVEH AAFKTSKLGK LGEGVHQSNS GLQKGKQKSL SFKIYNEAQT DCYASDNEKI  480
EATVEVKKSA SKGKRSSHYT THPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVPSAN  540
PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFCNRELNIK EKLSSCLSRY  600
QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE  660
QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI  720
VLTVDHSRCS VQFDQPELGV EHIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELKI  780
NEQLKEGTTK GYMKISSSDK LVSTGVPGYI LPSNHRINKS SKQTGVKSSS FNVQAKVGPG  840
ETASTQVANY QPSIPAQTQA KEADVQAIYE LTRALDKKEA VVSELRRMND EVFENQRDED  900
NSIRDSEPFK KEYAAVLLQL SQVNDQVSSA LLCLRQRNTY RGSSPHTVVK PMDNLSGPGS  960
HSNSYGYSCD VQESASHMRE IVESSRAKAH KMVDAAMQAF SSLRKENNFD KIEEVIDFVS  1020
NRLSDDAGML AMGSSTTPAD PIPFSQDQLT SWTSKPLATG CAHDPPKSNN LSNQSKEKLL  1080
SDLIVNCVAA FMMIQTCTAR QFPPADVAQV LDHAVTSLQP FCPQNLSVYG EIQKCTGIIR  1140
NQIMALVPTL SLCPNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein