PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g143260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 97aa    MW: 10703 Da    PI: 8.4912
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g143260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.0006410293554
                      TS-STCHHHHHHHHHHHHHH CS
               HLH 35 skKlsKaeiLekAveYIksL 54
                      ++K + a+i   A++YIk+L
  Pd.00g143260.m01 10 GGKTDRASIMGDAIDYIKEL 29
                      689***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MFIFGKQSLG GKTDRASIMG DAIDYIKELL RTMEELQLLA EKNRRGRETS KRLKTEQDGG  60
AGDDDGCNMK PLGNSHDRSY NNGLSGALMA SKEIRGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.15e-13bHLH family protein