PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g142000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 444aa MW: 49546.8 Da PI: 6.2975

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g142000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	1.1e-07	382	415	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Pd.00g142000.m01 382 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 415 469*****************************87 PP
2	ELK	28.7	2.9e-10	336	357	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Pd.00g142000.m01 336 ELKHELKQGYKEKIVDIREEIL 357 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPT EPHHPFQAAP NWLNTALRNF 60 TNADANNNHN NSPNNNGGGG ASNFLNLHVT ASDSTTSQAS NQWLSQPHRP ILHRNHSDVI 120 DDVTAVAGDS MIAATISHDS ADLKPDSSLN KTDIVVESGG GDGGMINWQN ARHKAEILSH 180 PLYEPLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY SALGHGMVGD DKELDQFMRH 240 YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM SDDEDDQVDS 300 DANLFDGSMD GHDSMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR 360 RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN 420 PSTSTVLKSK RKSNAGENSG DRFG

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPT EPHHPFQAAP NWLNTALRNF  60
TNADANNNHN NSPNNNGGGG ASNFLNLHVT ASDSTTSQAS NQWLSQPHRP ILHRNHSDVI  120
DDVTAVAGDS MIAATISHDS ADLKPDSSLN KTDIVVESGG GDGGMINWQN ARHKAEILSH  180
PLYEPLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY SALGHGMVGD DKELDQFMRH  240
YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM SDDEDDQVDS  300
DANLFDGSMD GHDSMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR  360
RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN  420
PSTSTVLKSK RKSNAGENSG DRFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein