PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g141410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 226aa    MW: 25068.9 Da    PI: 8.9642
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g141410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-18655255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  Pd.00g141410.m01  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                      89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVQSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPTSNNNNN NNSSGQDTKP TDQDSPWSPK ALSELLNSKL RKCCKDPSPS LTCLRLDNDN  120
SHIGVWQKRP AGSRASSNWV MRIELGKKKK HISDHHGSMC SSSSSSSPSS VSSSTSSSMV  180
GLIEAGMSEA DQDEEDKLAM QMIEELLNWN YPIPSTTSNV QEGNII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.11e-65ERF family protein