PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g139200.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1125aa MW: 125726 Da PI: 8.5355

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g139200.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.3	2.1e-09	30	65	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g139200.m02 30 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 65 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1125 aa Download sequence
MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVRHR 60 SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTDHYCILG GSDSEQENNE DAETSRKPQK 120 HAMSKLRSES SKGLEGHIPD FSESHPLAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY 180 SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT 240 TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG 300 TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD AKVVKSARSF 360 YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK 420 GSRPIPGVEH AAFKTSKLGK LGERVHQSNS GLQKGKQKSL SFKIYNEAQT DCYASDNEKI 480 EATVEVKKSA IKGKRSSHYT THPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVPSAN 540 PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFCNRELNIK EKLSSCLSRY 600 QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE 660 QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI 720 VLTVNHSRCS VQFDQPELGV EYIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELEI 780 NEQLKEGTTK GYMKISSSDK LVKSSSFNVQ AKVGPGETAS TQVANYQPSI PAQTQAKEAD 840 VQAIYELTRA LDKKEAVVSE LRRMNDEVFE NQRDEDNSIR DSEPFKKEYA AVLLQLSQVN 900 DQVSSALLCL RQRNTYRGSS PHTVVKPMDN LSGPGSHSNS YGYSCDVQES ASHMREIVES 960 SRAKAHKMVD AAMQAFSSLR KENNFDKIEE VIDFVSNRLS DDAGMLAMGS STTPVDPIPF 1020 SQDQLTSCTS KPLATGCAHD PPKSNNLSNQ SEEKLLSDLI VNCVAAFMMI QTCTARQFPP 1080 ADVAQVLDHA VTSLQPFCPQ NLSVYGEIQK CMGIIRNQIM ALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1125 aa Download sequence

MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVRHR  60
SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTDHYCILG GSDSEQENNE DAETSRKPQK  120
HAMSKLRSES SKGLEGHIPD FSESHPLAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY  180
SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT  240
TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG  300
TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD AKVVKSARSF  360
YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK  420
GSRPIPGVEH AAFKTSKLGK LGERVHQSNS GLQKGKQKSL SFKIYNEAQT DCYASDNEKI  480
EATVEVKKSA IKGKRSSHYT THPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVPSAN  540
PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFCNRELNIK EKLSSCLSRY  600
QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE  660
QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI  720
VLTVNHSRCS VQFDQPELGV EYIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELEI  780
NEQLKEGTTK GYMKISSSDK LVKSSSFNVQ AKVGPGETAS TQVANYQPSI PAQTQAKEAD  840
VQAIYELTRA LDKKEAVVSE LRRMNDEVFE NQRDEDNSIR DSEPFKKEYA AVLLQLSQVN  900
DQVSSALLCL RQRNTYRGSS PHTVVKPMDN LSGPGSHSNS YGYSCDVQES ASHMREIVES  960
SRAKAHKMVD AAMQAFSSLR KENNFDKIEE VIDFVSNRLS DDAGMLAMGS STTPVDPIPF  1020
SQDQLTSCTS KPLATGCAHD PPKSNNLSNQ SEEKLLSDLI VNCVAAFMMI QTCTARQFPP  1080
ADVAQVLDHA VTSLQPFCPQ NLSVYGEIQK CMGIIRNQIM ALVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein