PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g139200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1149aa MW: 128248 Da PI: 8.7171

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g139200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.1e-09	30	65	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g139200.m01 30 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 65 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1149 aa Download sequence
MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVRHR 60 SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTDHYCILG GSDSEQENNE DAETSRKPQK 120 HAMSKLRSES SKGLEGHIPD FSESHPLAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY 180 SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT 240 TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG 300 TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD AKVVKSARSF 360 YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK 420 GSRPIPGVEH AAFKTSKLGK LGERVHQSNS GLQKGKQKSL SFKIYNEAQT DCYASDNEKI 480 EATVEVKKSA IKGKRSSHYT THPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVPSAN 540 PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFCNRELNIK EKLSSCLSRY 600 QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE 660 QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI 720 VLTVNHSRCS VQFDQPELGV EYIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELEI 780 NEQLKEGTTK GYMKISSSDK LVSTGVPGYI LPSNHRINKS SKQTGVKSSS FNVQAKVGPG 840 ETASTQVANY QPSIPAQTQA KEADVQAIYE LTRALDKKEA VVSELRRMND EVFENQRDED 900 NSIRDSEPFK KEYAAVLLQL SQVNDQVSSA LLCLRQRNTY RGSSPHTVVK PMDNLSGPGS 960 HSNSYGYSCD VQESASHMRE IVESSRAKAH KMVDAAMQAF SSLRKENNFD KIEEVIDFVS 1020 NRLSDDAGML AMGSSTTPVD PIPFSQDQLT SCTSKPLATG CAHDPPKSNN LSNQSEEKLL 1080 SDLIVNCVAA FMMIQTCTAR QFPPADVAQV LDHAVTSLQP FCPQNLSVYG EIQKCMGIIR 1140 NQIMALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1149 aa Download sequence

MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVRHR  60
SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTDHYCILG GSDSEQENNE DAETSRKPQK  120
HAMSKLRSES SKGLEGHIPD FSESHPLAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY  180
SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT  240
TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG  300
TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD AKVVKSARSF  360
YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK  420
GSRPIPGVEH AAFKTSKLGK LGERVHQSNS GLQKGKQKSL SFKIYNEAQT DCYASDNEKI  480
EATVEVKKSA IKGKRSSHYT THPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVPSAN  540
PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFCNRELNIK EKLSSCLSRY  600
QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE  660
QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI  720
VLTVNHSRCS VQFDQPELGV EYIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELEI  780
NEQLKEGTTK GYMKISSSDK LVSTGVPGYI LPSNHRINKS SKQTGVKSSS FNVQAKVGPG  840
ETASTQVANY QPSIPAQTQA KEADVQAIYE LTRALDKKEA VVSELRRMND EVFENQRDED  900
NSIRDSEPFK KEYAAVLLQL SQVNDQVSSA LLCLRQRNTY RGSSPHTVVK PMDNLSGPGS  960
HSNSYGYSCD VQESASHMRE IVESSRAKAH KMVDAAMQAF SSLRKENNFD KIEEVIDFVS  1020
NRLSDDAGML AMGSSTTPVD PIPFSQDQLT SCTSKPLATG CAHDPPKSNN LSNQSEEKLL  1080
SDLIVNCVAA FMMIQTCTAR QFPPADVAQV LDHAVTSLQP FCPQNLSVYG EIQKCMGIIR  1140
NQIMALVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein