PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g137010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 30397.5 Da PI: 6.8656 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.3 | 1.5e-14 | 115 | 161 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L Pd.00g137010.m01 115 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 161 79*************************9.....8****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MEIANSMEER GDLTEPWTLP PIHSFNPSAH DQFLLPTPPP PIPSSSSYAS FFNRRAPLQF 60 TYDGSASEHH HHLRILSETL GPMVQPGSAP FGLQAELGKL TAQEIMDAKA LAASKSHSEA 120 ERRRRERINN HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSPVPTEMDE 180 LIVDDASDED GKFVIKASLC CEDRSDLLPD LIKTLKALRL RTLKAEITTL GGRVKNVLSI 240 EEALKAVMEK TGGEHEQSSS GSVKRQRTNN INILN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 126 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 7e-91 | bHLH family protein |