PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g136580.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 339aa    MW: 38027.1 Da    PI: 4.6466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g136580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.1e-19117166154
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                       s ++GVr++k +g+W+AeIrd +     + +r +lg+f t+e+A ka++a r+++e
  Pd.00g136580.m01 117 SPFRGVRQRK-WGKWAAEIRDpF-----KgRRTWLGTFNTPEDASKAYEAKRLEFE 166
                       679******9.**********55.....45***********************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MPEPRKQQLN QRNGFRKFKE DRFPAQDSKK VRKVRIICYD PDATDESSSS EDEGRGRSYV  60
KKSKRIVHEI NLHPIFTPPA KVVVEPESSC QDSNNGVKTP KPKVGFFART TRRQSSSPFR  120
GVRQRKWGKW AAEIRDPFKG RRTWLGTFNT PEDASKAYEA KRLEFEELWA RETAAPAASS  180
EKSNNTSSSA VVSHMSYANI QQPVSSEDSD SALSRRSPSS VLDLETSASN NIGNVVDLEK  240
EVVDDSPDLG ELQIPDLGFL DDPLGSLPFE NELSLGPELD SLCLEEFGKF FNEFSSIEDV  300
QIGGIDGYEP TSLPDFYFED LGKDDISCWL DEPLNIACQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12964KKVRKVRIICYDPDATDESSSSEDEGRGRSYVKKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.19e-29ERF family protein