PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g134650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 485aa MW: 53227.2 Da PI: 6.0978 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.2e-05 | 125 | 147 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp+Cg+sF++ ++ +H t+ Pd.00g134650.m01 125 YECPICGQSFRSEDEVSVHVDTC 147 99*****************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 485 aa Download sequence |
MGDKFKEFIK NPFSSSSSGK FKGQGRVLGS SSSGPANSAL LRQSQAPQSK PKPNPVSNSN 60 SNSSSPAASP NPKPSPQKTQ NLDQNKPEFS NNSKPNRKPE NGFDPFDSLI TPGKRSQNGY 120 TLNVYECPIC GQSFRSEDEV SVHVDTCVNT SVDNKSAEGL GVSGSEDIGV GSSRSELEAR 180 IGTFASGNPA TGSVEVVLRL LRNIVKEPEN VKFRKIRMSN PKIREAIGDV VGGIELLEFV 240 GFELKEEEGE MWAMMEVPSE EQISLMKNGI ALLEPPKVQE LQKIENSPSI DTPKVDEQIE 300 PKKVDRQTKV FFSVSESVAA RIELPESFYN LSAMELKREA ETRKKKIEDS QMLIPRSYKE 360 KQAKAAKNRY RKTVVRIQFP DGVVLQGVFS PWESTSSLYE YVSSALKEPS LEFELLNPVA 420 IKRRVIPHFP RAGEKAATLA DEDLVPSALV KFKPIETDSV VFTGLCNELL EISEPLTSGS 480 AVAPV |