PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g132220.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 209aa MW: 23724 Da PI: 8.4586 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.3 | 1.9e-26 | 44 | 133 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA++vGF vr+ + ++s +g++ r++ C+k+g++ ++k k e+++r++ r gC+a++ vk+ek+gkw+vt+++++HnH+l+ Pd.00g132220.m01 44 KYYTDYARQVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQKGKFGPEKKPRPSAREGCNATILVKMEKSGKWVVTRFVKDHNHPLV 133 69*********************************************9****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MTVDLEREAG AVDESVEIAI VASEGPIPEP YVGMEFDSED AARKYYTDYA RQVGFVVRVM 60 QRRRSGIDGR TLARRLGCNK QGFSPNQKGK FGPEKKPRPS AREGCNATIL VKMEKSGKWV 120 VTRFVKDHNH PLVVTASGFS TAGDKDRKIE ELMMELERQD QLCAGYREKL LSFMNNVEAE 180 TEELSEKIQV IVDNVRKVES EVQKHSRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 1e-74 | FAR1 family protein |