PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g131660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 582aa MW: 63455.5 Da PI: 6.8583

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g131660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.9e-09	396	443	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g131660.m01 396 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 443 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSLEQ SPDRFYNPNW 60 DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG 120 IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA 180 EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR 240 VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS 300 RKRKSVSKGK AKEPPPISSP SPIATKGAEL NDNSNAKRSK PNENNGNDQN GSVKAEEDTK 360 GSTSSDEKQT RTGPKPPEPP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKLLQDLVP 420 GCNKVTGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNTRL DFNVDALMSK EIFQQNNSLP 480 QHPIFPLDSS AQAIYGHQRQ QNPALQNNIS NGAVDPLDTS LCQSLGMQLP PLSGFNSEGI 540 PQFPAFGEDD LQTIVQMGYG QNPNRETELD GSNQVSHMKI EL

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSLEQ SPDRFYNPNW  60
DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG  120
IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA  180
EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR  240
VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS  300
RKRKSVSKGK AKEPPPISSP SPIATKGAEL NDNSNAKRSK PNENNGNDQN GSVKAEEDTK  360
GSTSSDEKQT RTGPKPPEPP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKLLQDLVP  420
GCNKVTGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNTRL DFNVDALMSK EIFQQNNSLP  480
QHPIFPLDSS AQAIYGHQRQ QNPALQNNIS NGAVDPLDTS LCQSLGMQLP PLSGFNSEGI  540
PQFPAFGEDD LQTIVQMGYG QNPNRETELD GSNQVSHMKI EL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	305	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-115	bHLH family protein