PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g131260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 26387.7 Da PI: 9.2742 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.9 | 9.2e-12 | 108 | 149 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+ Pd.00g131260.m01 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MVSLRRRRLL GLCSGVSPVL DPLPRLCDNG TVPQNFTWTN PVSVHPMPSN DANQPDGNAS 60 VKVEARSPTA SGSSLSKEQH DQQVAGPPIK RRKRHRRKHF QNQEPCLMRG VYFKNMKWQA 120 AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKQELRKF KWDEFLAMTR 180 HAITNKKHRR RPGAESHKRS ETPLENGDWD DKEEVDSLSA SEDMEQDMLG S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G13040.1 | 9e-48 | ERF family protein |