PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1306520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 364aa    MW: 40316.7 Da    PI: 7.328
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1306520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.1e-11299344655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri +++ +L++l P+     +k  + ae+L +Ave+Ik+Lq
  Pd.00g1306520.m01 299 SIAERMRRTRISERMKKLQDLFPNM----DKQINTAEMLDLAVEFIKDLQ 344
                        689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MDLVDNNGGV GCEDSRYLRP SSPEVETVLA RFMSSCNEPD HHDNGANSLQ HQFEERAVKQ  60
EAGDSVSKQN GYSNSSPMMY QAQQVHALDN NSFAAINSTG LENSMQSKIG VGNRPNLVRQ  120
SSSPAGFFPD LIVDNGFNVM KDGVSFRAGN GINGEASPSS TSRLNNQLNF SSGPSSYPSR  180
MPRIAEMENG NMGDGSQQDQ GLGNASNSHC ISNFPNDSWD ISSFNDLKRG RNNDGNKFSN  240
STALETQNND FGHRNHGLTH HLSLPKHFEM PAMEKFLQFE DSIPCKIRAK RGFATHPRSI  300
AERMRRTRIS ERMKKLQDLF PNMDKQINTA EMLDLAVEFI KDLQKQVKTL GDIKAKCSCS  360
SKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.17e-60bHLH family protein