PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g130250.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 452aa    MW: 49954.6 Da    PI: 6.445
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g130250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.63.4e-16283329455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  Pd.00g130250.m01 283 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 329
                       6*************************8.....6******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MNRCVPDFEM EDDYSIPTSS APNRLRKSSL PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK  60
SSQAPSKYDA VLPEDRDIPR PQPHPTHQNH QLFMHEDEMA SWLQYPLVDD PFCADLLYPD  120
SSTAAAAAEL RPNPISAPPI HPPRRTELQN FLHFSRTNNN KDRVSEAAPS SSKSVVREST  180
TVVDSCDTPL VGHSSRALDS GLDGGGGVTA GAATSFVTVA TANAATSFPG KEKPRADEDR  240
KRKGREAEDD GEFQSEDVEF ESANGKKKSR GSTSTKRSRA AEVHNLSERR RRDRINEKMK  300
ALQELIPRCN KSDKASMLDE AIEYLKSLQL QVQMMSMGCG MVPMMFPAGS SIPTAAAHLG  360
PRFPVPPFHM QPIPANDPAR VQATNQSDQM LNVLAAQNPN QSRVPNFADP YQQFFNPQQM  420
QLPLQQNQAM AQPSSKPSSS KGPETQENHQ SG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1240268RKRKGREAEDDGEFQSEDVEFESANGKKK
2288293ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.23e-63bHLH family protein