PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g130250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 452aa MW: 49954.6 Da PI: 6.445 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.6 | 3.4e-16 | 283 | 329 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq Pd.00g130250.m01 283 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 329 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence |
MNRCVPDFEM EDDYSIPTSS APNRLRKSSL PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK 60 SSQAPSKYDA VLPEDRDIPR PQPHPTHQNH QLFMHEDEMA SWLQYPLVDD PFCADLLYPD 120 SSTAAAAAEL RPNPISAPPI HPPRRTELQN FLHFSRTNNN KDRVSEAAPS SSKSVVREST 180 TVVDSCDTPL VGHSSRALDS GLDGGGGVTA GAATSFVTVA TANAATSFPG KEKPRADEDR 240 KRKGREAEDD GEFQSEDVEF ESANGKKKSR GSTSTKRSRA AEVHNLSERR RRDRINEKMK 300 ALQELIPRCN KSDKASMLDE AIEYLKSLQL QVQMMSMGCG MVPMMFPAGS SIPTAAAHLG 360 PRFPVPPFHM QPIPANDPAR VQATNQSDQM LNVLAAQNPN QSRVPNFADP YQQFFNPQQM 420 QLPLQQNQAM AQPSSKPSSS KGPETQENHQ SG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 240 | 268 | RKRKGREAEDDGEFQSEDVEFESANGKKK |
2 | 288 | 293 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.2 | 3e-63 | bHLH family protein |