PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1299260.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 606aa MW: 66464.6 Da PI: 6.6354

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1299260.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	495	543	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G+g+W+ I r Rt ++k++w+++l Pd.00g1299260.m02 495 AWTLVEVIKLVEGVSKCGTGRWSEIKRLSFasySYRTSVDLKDKWRNLL 543 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
METVVGVEGS DEGKCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGDGRL VPATDDEVME 60 VEEFLVDEKI EIPVVTDAGN VECISNEESS SGKSHKESSE GPSHSENTEP DAKLSARLEE 120 IVPSSDLSLD DSHINESARI GECSKPPDGP IESGSPASVI CNSSKPDFYT LKGEICLDNL 180 SIRELHGLFR ATFGRETTVK DKLWLKRRIA MGLTNSCDVS TTTFTIIDNK LVNKGTDNSF 240 QNADGMLTEG SDGEAKNLGY ETSPTSHSSQ MENHQIVLGK RLGNLSVELD CGSDDLQMEH 300 RGAKRVRKPT KRYIEELSEV ESRDYTPKVI GSAKNTGQGQ TSPKYCIRPP GNSPLNERTI 360 VTRLDSLGGS GVQVPFVSRV RRSRPRKNIM ALMKFDSSGM GVAAKLVQEA LSVRSSPPES 420 EHADKVLKVR SASEQIQPQF AAEPEKDKRR SVMSTIELGK NLGLKQTDSS EDNSDDGIAT 480 VPTAKGGMRR KHHRAWTLVE VIKLVEGVSK CGTGRWSEIK RLSFASYSYR TSVDLKDKWR 540 NLLKASFAQT PPDDGINSRK HASVPIPAAI LLKVRELAEM HAQLQRHRRQ LSHVVAAEKI 600 QQQWGS

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

METVVGVEGS DEGKCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGDGRL VPATDDEVME  60
VEEFLVDEKI EIPVVTDAGN VECISNEESS SGKSHKESSE GPSHSENTEP DAKLSARLEE  120
IVPSSDLSLD DSHINESARI GECSKPPDGP IESGSPASVI CNSSKPDFYT LKGEICLDNL  180
SIRELHGLFR ATFGRETTVK DKLWLKRRIA MGLTNSCDVS TTTFTIIDNK LVNKGTDNSF  240
QNADGMLTEG SDGEAKNLGY ETSPTSHSSQ MENHQIVLGK RLGNLSVELD CGSDDLQMEH  300
RGAKRVRKPT KRYIEELSEV ESRDYTPKVI GSAKNTGQGQ TSPKYCIRPP GNSPLNERTI  360
VTRLDSLGGS GVQVPFVSRV RRSRPRKNIM ALMKFDSSGM GVAAKLVQEA LSVRSSPPES  420
EHADKVLKVR SASEQIQPQF AAEPEKDKRR SVMSTIELGK NLGLKQTDSS EDNSDDGIAT  480
VPTAKGGMRR KHHRAWTLVE VIKLVEGVSK CGTGRWSEIK RLSFASYSYR TSVDLKDKWR  540
NLLKASFAQT PPDDGINSRK HASVPIPAAI LLKVRELAEM HAQLQRHRRQ LSHVVAAEKI  600
QQQWGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	387	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-98	MYB_related family protein