PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1299260.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 662aa MW: 72847.9 Da PI: 6.4233

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1299260.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.8e-08	551	599	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G+g+W+ I r Rt ++k++w+++l Pd.00g1299260.m01 551 AWTLVEVIKLVEGVSKCGTGRWSEIKRLSFasySYRTSVDLKDKWRNLL 599 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
METVVGVEGS DEGKCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGDGRL VPATDDEVME 60 VEEFLVDEKI EIPVVTDAGN VECISNEESS SGKSHKESSE GPSHSENTEP DAKLSARLEY 120 IEEMLQKVKQ EEKLRLACGS PDHSSAFMNV DSQCSDQHDK LPAIDKKLQS EIPLQEIVPS 180 SDLSLDDSHI NESARIGECS KPPDGPIESG SPASVICNSS KPDFYTLKGE ICLDNLSIRE 240 LHGLFRATFG RETTVKDKLW LKRRIAMGLT NSCDVSTTTF TIIDNKLVNK GTDNSFQNAD 300 GMLTEGSDGE AKNLGYETSP TSHSSQMENH QIVLGKRLGN LSVELDCGSD DLQMEHRGAK 360 RVRKPTKRYI EELSEVESRD YTPKVIGSAK NTGQGQTSPK YCIRPPGNSP LNERTIVTRL 420 DSLGGSGVQV PFVSRVRRSR PRKNIMALMK FDSSGMGVAA KLVQEALSVR SSPPESEHAD 480 KVLKVRSASE QIQPQFAAEP EKDKRRSVMS TIELGKNLGL KQTDSSEDNS DDGIATVPTA 540 KGGMRRKHHR AWTLVEVIKL VEGVSKCGTG RWSEIKRLSF ASYSYRTSVD LKDKWRNLLK 600 ASFAQTPPDD GINSRKHASV PIPAAILLKV RELAEMHAQL QRHRRQLSHV VAAEKIQQQW 660 GS

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

METVVGVEGS DEGKCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGDGRL VPATDDEVME  60
VEEFLVDEKI EIPVVTDAGN VECISNEESS SGKSHKESSE GPSHSENTEP DAKLSARLEY  120
IEEMLQKVKQ EEKLRLACGS PDHSSAFMNV DSQCSDQHDK LPAIDKKLQS EIPLQEIVPS  180
SDLSLDDSHI NESARIGECS KPPDGPIESG SPASVICNSS KPDFYTLKGE ICLDNLSIRE  240
LHGLFRATFG RETTVKDKLW LKRRIAMGLT NSCDVSTTTF TIIDNKLVNK GTDNSFQNAD  300
GMLTEGSDGE AKNLGYETSP TSHSSQMENH QIVLGKRLGN LSVELDCGSD DLQMEHRGAK  360
RVRKPTKRYI EELSEVESRD YTPKVIGSAK NTGQGQTSPK YCIRPPGNSP LNERTIVTRL  420
DSLGGSGVQV PFVSRVRRSR PRKNIMALMK FDSSGMGVAA KLVQEALSVR SSPPESEHAD  480
KVLKVRSASE QIQPQFAAEP EKDKRRSVMS TIELGKNLGL KQTDSSEDNS DDGIATVPTA  540
KGGMRRKHHR AWTLVEVIKL VEGVSKCGTG RWSEIKRLSF ASYSYRTSVD LKDKWRNLLK  600
ASFAQTPPDD GINSRKHASV PIPAAILLKV RELAEMHAQL QRHRRQLSHV VAAEKIQQQW  660
GS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	443	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-116	MYB_related family protein