PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1299160.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 428aa MW: 47301.1 Da PI: 8.0295

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1299160.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.3e-15	104	163	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g1299160.m01 104 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 163 789****************655454478446***********************98 PP
2	AP2	48.6	2e-15	206	257	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g1299160.m01 206 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 257 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MTIMPLRSDG SLCVPPADPF RRPNGSEDWR YENHMGATSV TDPNDEGGPK LEDFLGSCYS 60 SSPPPSETKV YNCQMESKKR PVGKSAAREP VPRKSIDTFG QRTSQFRGVT RHRWTGRYEA 120 HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA ARAYDLAALK YWGSTTHINF PLSTYEKELE 180 EMKNMTRQEF VANLRRKSSG FSRGASVYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST 240 QEEAAEAYDI AAIKFRGTSA VTNFDMSRYD VKRICSSSTL IASELAKRSP KDSTPAAIED 300 FNSCGSSTSA QPLLAIASGE PCDDMAEMVW NNNNAEDHSH SHHENSNTTN NNAALGASSS 360 RNSSSPQSPK CSFGHTSEFG LGGGDYSHAY FSLQGAKYED GNGGGNDHSR LGNLGLVPQV 420 PMFALWND

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MTIMPLRSDG SLCVPPADPF RRPNGSEDWR YENHMGATSV TDPNDEGGPK LEDFLGSCYS  60
SSPPPSETKV YNCQMESKKR PVGKSAAREP VPRKSIDTFG QRTSQFRGVT RHRWTGRYEA  120
HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA ARAYDLAALK YWGSTTHINF PLSTYEKELE  180
EMKNMTRQEF VANLRRKSSG FSRGASVYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST  240
QEEAAEAYDI AAIKFRGTSA VTNFDMSRYD VKRICSSSTL IASELAKRSP KDSTPAAIED  300
FNSCGSSTSA QPLLAIASGE PCDDMAEMVW NNNNAEDHSH SHHENSNTTN NNAALGASSS  360
RNSSSPQSPK CSFGHTSEFG LGGGDYSHAY FSLQGAKYED GNGGGNDHSR LGNLGLVPQV  420
PMFALWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-128	AP2 family protein