PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1297940.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 1138aa MW: 128407 Da PI: 7.2933

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1297940.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36.1	1.1e-11	8	58	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t++qle+Le+++ ++ryps++++e A+ +Lt +qV+ WF +R +ek+ Pd.00g1297940.m02 8 KTQSQLEALESFYSEDRYPSRTAMECHAAAFRLTYKQVRGWFVEKRRREKR 58 699**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1138 aa Download sequence
MMEKIKRKTQ SQLEALESFY SEDRYPSRTA MECHAAAFRL TYKQVRGWFV EKRRREKREN 60 KTTEELGGRN GSGAGAPRVV KHCPSKAPLL LRYKQTQMNG NHIQELLTPD YILKKVFRKD 120 GPPLGVEFDS LPSRALFHST DPEDLHPPCK ENQRETKRRK VTEHAVIGHH NCNESAPVKK 180 HGVGKGLMTV WRATNPDARD FPVDMGFANG GVTSVSLIPT SVLRKPVTRN RRLQQKKSVP 240 KQGRVRNKVQ EKRKHFVKRR EVESNNENQT LPSKEKCELA LEGASSQEHS DKIAMLVDDE 300 ELELRELQGR PNALGCSDHF TTNGDHACSL CKDLLAKFPP NSVKMKQPFC MQPWDSSPEI 360 VKKLFKVFHF LCTYAVMVDI SSFTIDEFAQ AFQDKDSLLL GKIHVALLKL LLSNVEAELG 420 CGSIPHLSKS CNFLAFIHSV ENQESTLEFW KRSLNPLTWT EILRQVLVAA GFGSKQGAMR 480 RDALSKEMSL MVKYGLRPGT LKGELFRVLL EQGIHGLKVS ELAKSLQISE LNLSSGIEDL 540 ESLIGSTLSS DITLFEKISS STYRVRINSS EKEVEESQSD TEDSGAVDDD LGDSGTCSSD 600 DDSGCNSGNS QIKKLTYMNH GKSKDNMVTV YTEIDESHPG EVWLLGLMEG EYSDLSIEEK 660 LSAIVALIDL LHAGSSFRME DPINAIAECV PSSLHSGSGA KIKRLSTKQH GMPRPTWVHA 720 GHTSGAKEDY TLKFHPIDSS GSISKFSDER FSTKEKNGKE REVRFDIHPM QSVFLGSDRR 780 YNRYWLFLGP CNAYDPGHRR VYFESSEDGH WEVIDTEEAL CALLSVLDDR GKREALLIES 840 LEKRIAFLCQ AMSSRMVNSD RIDNLAQSDQ SELDSVREDT YSPVSDVDNN LSGIANDSLP 900 SSGVVVLEVR KKGEQQKQKW SRIQAFDSWL WNSFYLDLNA VKHGKRSYFD TLTRCESCHD 960 LYWRDEKHCR ICHTTFELHF DLEERYAIHV ATCKEKEAID TFPKHKVLSS QIQSLKAAMH 1020 AIESAMPEDA LLGAWKKSAH KLWVKRLRRT SSLAELLQVL GDFVGAINED RLYECNIEQG 1080 SCNFSEELIA SFACVPQTTS AVALWLVRLD ALIAPYLERA HSQKRLEISV RGKHAPKQ

Sequence ? help Back to Top

Protein Sequence Length: 1138 aa Download sequence

MMEKIKRKTQ SQLEALESFY SEDRYPSRTA MECHAAAFRL TYKQVRGWFV EKRRREKREN  60
KTTEELGGRN GSGAGAPRVV KHCPSKAPLL LRYKQTQMNG NHIQELLTPD YILKKVFRKD  120
GPPLGVEFDS LPSRALFHST DPEDLHPPCK ENQRETKRRK VTEHAVIGHH NCNESAPVKK  180
HGVGKGLMTV WRATNPDARD FPVDMGFANG GVTSVSLIPT SVLRKPVTRN RRLQQKKSVP  240
KQGRVRNKVQ EKRKHFVKRR EVESNNENQT LPSKEKCELA LEGASSQEHS DKIAMLVDDE  300
ELELRELQGR PNALGCSDHF TTNGDHACSL CKDLLAKFPP NSVKMKQPFC MQPWDSSPEI  360
VKKLFKVFHF LCTYAVMVDI SSFTIDEFAQ AFQDKDSLLL GKIHVALLKL LLSNVEAELG  420
CGSIPHLSKS CNFLAFIHSV ENQESTLEFW KRSLNPLTWT EILRQVLVAA GFGSKQGAMR  480
RDALSKEMSL MVKYGLRPGT LKGELFRVLL EQGIHGLKVS ELAKSLQISE LNLSSGIEDL  540
ESLIGSTLSS DITLFEKISS STYRVRINSS EKEVEESQSD TEDSGAVDDD LGDSGTCSSD  600
DDSGCNSGNS QIKKLTYMNH GKSKDNMVTV YTEIDESHPG EVWLLGLMEG EYSDLSIEEK  660
LSAIVALIDL LHAGSSFRME DPINAIAECV PSSLHSGSGA KIKRLSTKQH GMPRPTWVHA  720
GHTSGAKEDY TLKFHPIDSS GSISKFSDER FSTKEKNGKE REVRFDIHPM QSVFLGSDRR  780
YNRYWLFLGP CNAYDPGHRR VYFESSEDGH WEVIDTEEAL CALLSVLDDR GKREALLIES  840
LEKRIAFLCQ AMSSRMVNSD RIDNLAQSDQ SELDSVREDT YSPVSDVDNN LSGIANDSLP  900
SSGVVVLEVR KKGEQQKQKW SRIQAFDSWL WNSFYLDLNA VKHGKRSYFD TLTRCESCHD  960
LYWRDEKHCR ICHTTFELHF DLEERYAIHV ATCKEKEAID TFPKHKVLSS QIQSLKAAMH  1020
AIESAMPEDA LLGAWKKSAH KLWVKRLRRT SSLAELLQVL GDFVGAINED RLYECNIEQG  1080
SCNFSEELIA SFACVPQTTS AVALWLVRLD ALIAPYLERA HSQKRLEISV RGKHAPKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein