PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1296560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 157aa MW: 17717.6 Da PI: 5.6599 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.6 | 3e-08 | 100 | 147 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 GV+++ gr++A ++d +e + +k g f t+eeAa+a++ a++kl+g Pd.00g1296560.m01 100 GVSRYT-GGRYEAFLWDNTEpR--SKGKT-GGFETEEEAARAHDLAALKLWG 147 9*9999.8*********65543..56655.77*****************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MQQNSPWILE SSPVEAPHCN TFPSANYPFS SSMHVESDQD FIGEKNINDN GINIFGDPFM 60 SYDFINEEDN GRSGEKPMKR KRHCKNSKKK IVQTGSAFYG VSRYTGGRYE AFLWDNTEPR 120 SKGKTGGFET EEEAARAHDL AALKLWGDFA TLNFTVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G65510.1 | 2e-09 | AP2 family protein |