PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1296450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 323aa    MW: 36131.1 Da    PI: 8.6322
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1296450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.3e-13250295655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  Pd.00g1296450.m01 250 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 295
                        689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDSNSHQNLH SQEHQTHQPN SGLLRFRSAP SSLLANFNEN SDLGLIGKNP IEGSESERLF  60
SRFANYTHTN DSDSWPSSFQ ELDDKSTVTA TEAAVTESRM SSQQQGYSGL PPHYPRQSSF  120
NGSYGLVGSA AMNHHTQPKA VHSNLVRQSS SPAGLFSNSS VQNGFQFGTW NDSSNFAENL  180
GGMRRDQDND GKLFSVPQNG ELENRIHLLS HHLSLPKTSA EIAMEKFLQL QDSVPCKVRA  240
KRGCATHPRS IAERVRRTRI SERMRKLQEL VPNMDKQTNT ADMLDLAVEY IKDLQKQFKT  300
LSDVRANCKC LNMQKKPVSN QIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-102bHLH family protein