PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1296000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 654aa MW: 71294.1 Da PI: 8.3855

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1296000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.8	1.1e-17	443	492	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aa+a+++a+ l+g Pd.00g1296000.m01 443 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 492 59**999.******954...5*******************988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MAGSVRVKEA VVVAPSEPTP TCVLNLSAID SQLFLRFTIE YLLVYAPRPV LNQEATTTRV 60 KSALAKALVP YYPLAGRVRP KADGSSLEVV CRAQGAVFIE AVSDRATLSD FERAPRYVAQ 120 WRKLLSLQVA DVLKGAPPLV VQLTWLKDGA AALGVGFNHC LCDGIGSAEF LNSFAELAAG 180 KPGFANEFKP NPVWDRHLLD PQPVNHVMPR HRIPNAASHP EFNKVPDRCG FMNRFSNERL 240 IPTSITFENI YLRELKKLAL STSRLSTESA YTSFEVLSAH VWRSWARALN LASNQILKLL 300 FSVNVRNRVK PSLPGGYYGN AFVLGCAQSS VKDLEEKGLG HAAGLVKLAK ERVGEEHVRR 360 VVESVSESKA SPDTVGVLIV SQWSRLGLER VDFGMGRPVH VGPILSDRYC LFLPVGLISP 420 NAEIEHAQPE GTGKGGPDNN KFRYRGVRQR SWGKWVAEIR EPRKRTRKWL GTFATAEDAA 480 RAYDRAAIIL YGSRAQLNLQ PSGFGLTLPF PSPAHPVPLM ASGFVPYGVG VGVYPSVAAA 540 ATSSYPVSDG GGGDTSTSYQ NPNPSHDQYQ ELLHHNQNNQ ADSCSFDDGN SIMGSRLSLS 600 SSQPMPVAPG CSDPMSGVGP MSPLMWPLTS EEECAPSLWD YGDPFFLDFK GFDS

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MAGSVRVKEA VVVAPSEPTP TCVLNLSAID SQLFLRFTIE YLLVYAPRPV LNQEATTTRV  60
KSALAKALVP YYPLAGRVRP KADGSSLEVV CRAQGAVFIE AVSDRATLSD FERAPRYVAQ  120
WRKLLSLQVA DVLKGAPPLV VQLTWLKDGA AALGVGFNHC LCDGIGSAEF LNSFAELAAG  180
KPGFANEFKP NPVWDRHLLD PQPVNHVMPR HRIPNAASHP EFNKVPDRCG FMNRFSNERL  240
IPTSITFENI YLRELKKLAL STSRLSTESA YTSFEVLSAH VWRSWARALN LASNQILKLL  300
FSVNVRNRVK PSLPGGYYGN AFVLGCAQSS VKDLEEKGLG HAAGLVKLAK ERVGEEHVRR  360
VVESVSESKA SPDTVGVLIV SQWSRLGLER VDFGMGRPVH VGPILSDRYC LFLPVGLISP  420
NAEIEHAQPE GTGKGGPDNN KFRYRGVRQR SWGKWVAEIR EPRKRTRKWL GTFATAEDAA  480
RAYDRAAIIL YGSRAQLNLQ PSGFGLTLPF PSPAHPVPLM ASGFVPYGVG VGVYPSVAAA  540
ATSSYPVSDG GGGDTSTSYQ NPNPSHDQYQ ELLHHNQNNQ ADSCSFDDGN SIMGSRLSLS  600
SSQPMPVAPG CSDPMSGVGP MSPLMWPLTS EEECAPSLWD YGDPFFLDFK GFDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40220.1	6e-28	ERF family protein