PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1294700.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 431aa MW: 48825.6 Da PI: 8.3802

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1294700.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.9	1.7e-31	110	163	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Pd.00g1294700.m02 110 PRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 163 8****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	111	162	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ Pd.00g1294700.m02 111 RLRWTPDLHLAFVHAVERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 162 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MLSGGPKEIY RRDMAPERIE ISDEDDQSSD ASYEIQAKND CLVSSQKCLF FDLNEEASTG 60 DDDQDVSSNE GTQAVGSRTS PEGNLSCNNT SVEGKERTIA VRQYVRSKMP RLRWTPDLHL 120 AFVHAVERLG GQERATPKLV LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QVISQSSRGM 180 QVKDHILEAY HKFNPYGHLR HVDDNGSHFA SPPVLKQLPY DDFNANSSRL ISLWRVNSRI 240 DNHGSNIRSS NIFHVREAIT RDGPFRPSRF LEEKRWPPCE LIGNHMKGRR HLLNFTWGDI 300 NNVPQTNNLV WSAKASTINQ HQPNTCSPKF ISSSYEPLSQ LEVQKLQCIN GEMFQPKVGP 360 NMKTMRQKTW VPDLQLSLSH DFSNGSVVND SQESRKDFES MLSLSLSSSS ARQQEQSTTP 420 TSRIRLSVSR T

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MLSGGPKEIY RRDMAPERIE ISDEDDQSSD ASYEIQAKND CLVSSQKCLF FDLNEEASTG  60
DDDQDVSSNE GTQAVGSRTS PEGNLSCNNT SVEGKERTIA VRQYVRSKMP RLRWTPDLHL  120
AFVHAVERLG GQERATPKLV LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QVISQSSRGM  180
QVKDHILEAY HKFNPYGHLR HVDDNGSHFA SPPVLKQLPY DDFNANSSRL ISLWRVNSRI  240
DNHGSNIRSS NIFHVREAIT RDGPFRPSRF LEEKRWPPCE LIGNHMKGRR HLLNFTWGDI  300
NNVPQTNNLV WSAKASTINQ HQPNTCSPKF ISSSYEPLSQ LEVQKLQCIN GEMFQPKVGP  360
NMKTMRQKTW VPDLQLSLSH DFSNGSVVND SQESRKDFES MLSLSLSSSS ARQQEQSTTP  420
TSRIRLSVSR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-39	G2-like family protein