PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1294210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 378aa MW: 41907.1 Da PI: 6.2927 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.6e-18 | 27 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl Pd.00g1294210.m01 27 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 74 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.3e-15 | 80 | 122 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ Pd.00g1294210.m01 80 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 122 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MTDLDLLWGD KPRVGPAYTE ALHKVKRGLW SPEEDEKLIN YITTYGHGCW SSVPKLAGLQ 60 RCGKSCRLRW INYLRPDLKR GSFSPQEAAL IIELHSILGN RWAQIAKHLP GRTDNEVKNF 120 WNSSIKKKLI PHEVIPALAS FSHDIHNPSG NSEESFFTLT TNPNVGPQQD QLFLPIPNPM 180 PQGFNFHGDH NNINLIKLDQ TNYGSNFVHH FPAPLQLPSN SSSYESSWSL GYQPHHQFDP 240 NQHLQNFSID EAAAHYNIGN ELMVPISMAS SAPAVYENPS ILPTLPKLCE ILDGNVCRMP 300 CYPSDPQDLD SLAKLSCFPS THGAYPQDLQ FLSSQLECID AIISLPSSSS SSSPLSVSPS 360 LSPLSSTQFV ANPNVSEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 3e-71 | MYB family protein |